Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1704 ATGGCTGATTTTCAGACCTCTACACACCGAGCCAAGTGGATTTTCTCTCCTCAACAGCTGGTTGAGAAATATAGAGCTGCCAATCAGAGAGCCAAACAAATTCTAGAGAAGTGTGGAGCAACACTAATGGAAGTAGATGTTAATGGGTCGTTGTCATATCCTGAACCCCATATGACTGCAAAGGATAGTGCTGAAAAACATTATCGAACAAAACCTCTTAGTATTGAAGAAGAACAATGTATAAAGGTATTTTATGAAAACAAGCTACAAGAAGTATATAACAATTTCCGCTTCCCTCATAAGATCCAGGCAACAGCCCTTATCTATTTTAAAAGATTCTATCTGCAATGGTCAGTGATGGAACATCAACCAAAACATATTATGTTGACCTGCGTATATGCTGCTTGTAAAATAGAAGAAAATCATGTGTCAGCGGAGGAGCTTGGTAAGGGGATATCGCAGGATCATCAAATGATTCTCAATAATGAGATGATAGTTTATCAGAGTTTGGAATTTGATCTTATTGTGTATGCACCATATCGCTCAGTTGAAGGTTTTATAAATGATGTGGAGGAATTCTGTAATGCTGGTGATGACCAGCTTGAAATGCTCAAGACTTTGCAAGAGACAGCAAGATTTGAAGTTGATAAAATGATGCTTACAGATGCACCACTTTTATTTCCTCCTGGGCAGTTGGCCTTGGCTGCTCTAAGCAACTCAAATGCACTCCACAGAGTCATTGACTTTGATAGTTATCTTAGGGGCATTTTTTCCCATGAGAATTCCATGCATACAATGTCCGAGCTTTCTGAATCACTGAATGCAATTGATTCTTGGGTTAGAAAATATAAAAGTCCTTCTGAGAAGGAATTGAAGCATATCAACCGAAAACTGAAGTCTTGTTGGGGTCATAGTTCTCATGACGAGGGCAAGAAGCGGGAGAAGAAATCAAAGCACAAATCCAAAAAGAGCTCAAATGAAGCTCAAAATATGTCATCTCTTGCCTAG 1008 0.3899 MADFQTSTHRAKWIFSPQQLVEKYRAANQRAKQILEKCGATLMEVDVNGSLSYPEPHMTAKDSAEKHYRTKPLSIEEEQCIKVFYENKLQEVYNNFRFPHKIQATALIYFKRFYLQWSVMEHQPKHIMLTCVYAACKIEENHVSAEELGKGISQDHQMILNNEMIVYQSLEFDLIVYAPYRSVEGFINDVEEFCNAGDDQLEMLKTLQETARFEVDKMMLTDAPLLFPPGQLALAALSNSNALHRVIDFDSYLRGIFSHENSMHTMSELSESLNAIDSWVRKYKSPSEKELKHINRKLKSCWGHSSHDEGKKREKKSKHKSKKSSNEAQNMSSLA* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1704 335 CDD CYCLIN 89 167 IPR013763 -
Gso17g1704 335 Gene3D - 63 175 - -
Gso17g1704 335 SUPERFAMILY Cyclin-like 179 305 IPR036915 -
Gso17g1704 335 PANTHER CYCLIN-H 1 331 - -
Gso17g1704 335 MobiDBLite consensus disorder prediction 296 335 - -
Gso17g1704 335 Pfam Cyclin C-terminal domain 179 285 IPR031658 -
Gso17g1704 335 Gene3D - 177 282 - -
Gso17g1704 335 SMART cyclin_7 87 168 IPR013763 -
Gso17g1704 335 PANTHER CYCLIN 1 331 IPR043198 GO:0006357|GO:0016538
Gso17g1704 335 MobiDBLite consensus disorder prediction 296 312 - -
Gso17g1704 335 SUPERFAMILY Cyclin-like 13 176 IPR036915 -
Gso17g1704 335 Pfam Cyclin, N-terminal domain 89 174 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1704 Gso-Chr17 32180510 32185457 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1704 1 280 Core Cell Cycle Gene Families AT5G27620 65.357 7.02e-135 384
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1704 K06634 - gmx:100800023 661.373