Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1694 ATGGCACGTGTTGCTGATAAAATAAAATTGATAGATGGATCAAGGGAAGCTCTTAAGCTTTCTGTAAGGATCACTGATCTTTGGTTCATTGGGATTCCTGGAAAGACTGAACAAGCCGAAATGGTGGTTGTTGATTCTGATGATCAGCTGAAGTCTCGCAAGGCTTATTTGAAAGAGAATTTGACTTATGTGATGCATAATTTTAAAGTTATCAAGAATGATGGGAAATTCATATTTTTGTCTTATTTGAATGATATTGAAGATGAAAGGCCGATCGTTATTCTCTTGACTCATGCTAGGATTAAGGAAGCACAGGATTTAGGGATCGAGGTTAGATCAATTTTGGCGCCTATTGGACAAGGGAGTTCACAGGTTTCAGGCTCATCTCAATTATCATCAAAAGATGTGTTTCTGTCAAAGACTGAAGAGTTTGTTCGTGTTACTGTCGCCAAGATTACAACCATAGTGATGGACAACTATTCATGGTGCTATCCGGCTTGTGGTCAATGTTATAAAAAAGCTGACATGCAAACTGTGCCATTCACATGTCTGTATGGCAAAGAGAATGATCAACCTGTACTGAGGTATCGGGTTGAGGTGATGGTTAGTCACAAGGGTGAACAAACCAAATTTTTGATCTGGGATCGTGAATATGCACAGTTAATTGGTCAGTCAGTGGATGAAGTCAACAGGCTCAAAATAGAAGATGGAGATGTTGATTTAAATGCCTCTCCTCAAGCACTAGATAGACTATTGGGTTGTTTCCTTGCATTCAAAGTGAAGGTGCAACCAAGGTTCAGGAATTTTGTTGTTCTTAAATATTCAGATGAATTAGAGTTGATCAATGTTGTGCTAGATATGATTCCCGATAGTGAGCCATGTTGCAAGATCGAGAATTCAATACTTGAGTCGACCGATCCTACAGTGCTTGAATCTCAATCTCTGTCTATTACAGCTGATCATGATCGGTCAATGCTTGCCTCAAGTGAGCCTACAGAGTTTGAATCTCAATCTGTGTCTGTTACCGGGGATCATGACCCTCTTCTCGGGATTCCATTGACACCAACTAAGCGCGTATCTTCTTATGAGTTAGATAATGAGCGAAAAAACTTTGAGATCTCACCTGCTGAAGTTTCCTCGAACAAATTAGCCAAGCATTCTTAG 1164 0.3986 MARVADKIKLIDGSREALKLSVRITDLWFIGIPGKTEQAEMVVVDSDDQLKSRKAYLKENLTYVMHNFKVIKNDGKFIFLSYLNDIEDERPIVILLTHARIKEAQDLGIEVRSILAPIGQGSSQVSGSSQLSSKDVFLSKTEEFVRVTVAKITTIVMDNYSWCYPACGQCYKKADMQTVPFTCLYGKENDQPVLRYRVEVMVSHKGEQTKFLIWDREYAQLIGQSVDEVNRLKIEDGDVDLNASPQALDRLLGCFLAFKVKVQPRFRNFVVLKYSDELELINVVLDMIPDSEPCCKIENSILESTDPTVLESQSLSITADHDRSMLASSEPTEFESQSVSVTGDHDPLLGIPLTPTKRVSSYELDNERKNFEISPAEVSSNKLAKHS* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1694 387 Gene3D - 118 281 IPR012340 -
Gso17g1694 387 Pfam Replication factor-A C terminal domain 150 237 IPR013955 -
Gso17g1694 387 PANTHER REPLICATION FACTOR A 1, RFA1 11 238 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gso17g1694 387 SUPERFAMILY Nucleic acid-binding proteins 142 268 IPR012340 -
Gso17g1694 387 MobiDBLite consensus disorder prediction 330 354 - -
Gso17g1694 387 PANTHER RPA1 DOMAIN PROTEIN, PUTATIVE-RELATED 11 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1694 Gso-Chr17 32044031 32046588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1694 115 240 Core DNA Replication Machinery Family AT5G08020 31.655 1.82e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1694 - - gmx:102670354 502.671