Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1688 ATGCACATTGTTTGTTCAGTAAATGGTTCTCTGAAAGTGGCAAGCTGTAGATTCTTACGAGTCTACGAGTTGAGTCTATGGAGCTCTCACTGTAAACTCTCAAGTTTGATAACCAGAGTGAATGGAATAGATTTTGAGGATGTCAAAGTCGATTTATCCCAACATCACCAGCTATCTCCCCAATTCCGAGTGATTAACCCTTTAATGAAAGTCCCTGCTGTTGTTGATGGAAGGTTCAAACTATTTGAGAGACATAGATTTTGTGCAATGGCTGAAGAGAGACAAGTCATCGGCTTCCACACTGGTGATGCGTGGAAGGGCAACTCTAGAATGCAAAAGACTCCAAAAAACTGCACTGGCAGAGGAAAGACTTTTGATATGAGAAACGATAGAGAGAGAACAACAGGGTGTGGAGGTGGGAGTGGCTCAGGAAAGGACAAAATTGATTCTCTTAGTAGGCTCCTGACACGAATTTTACGGCATATGGCATCTGAATTGAATTTGAATATGCGGAGTGATGGTTATGTAAAAGTTAATGATTTGCTAAAGCTGAATCTGAAGACATTTGCTAATATTCCACTGAGATCGCACACTATTGATCATATTAGGGAGGCTGTTCGAAAAGATAATAAGCAGCGGTTTAGCCTCTTAGAAGAGAATGGGGAGCTACTAATACGTGCAAACCAAGGCCACACAGTAAAGGTCGTTGAAACTGAAAGTTTGTTGAAACCAATCCTTTCCGCCAAAGAATTTCCAGTTTGTTTGCATGGAACCTACAGAAAGAACCTAGAATCAATTCTAGGATCTGGTCTGAAGCGCATGAAGAGATTGCATGTTCATTTCTCTTGTGGTTTACCAACAGATGGAGAAGTAATTAGTGGTATGAGGCAGGATGTCAATGTTCTGATCTTTCTGGACGTTAGAAAAGCATTAGAAGAAAGTATAAAGCTTTACATTTCTGACAACAAGGTGATCTTGACGGAAGGTTTTGATGGTGTTGTTCCTCCGAAGTATTTTGAAAGGATAGAATCATGGCCGAGCAGACAGCCCATTTCTTTTTAA 1062 0.4068 MHIVCSVNGSLKVASCRFLRVYELSLWSSHCKLSSLITRVNGIDFEDVKVDLSQHHQLSPQFRVINPLMKVPAVVDGRFKLFERHRFCAMAEERQVIGFHTGDAWKGNSRMQKTPKNCTGRGKTFDMRNDRERTTGCGGGSGSGKDKIDSLSRLLTRILRHMASELNLNMRSDGYVKVNDLLKLNLKTFANIPLRSHTIDHIREAVRKDNKQRFSLLEENGELLIRANQGHTVKVVETESLLKPILSAKEFPVCLHGTYRKNLESILGSGLKRMKRLHVHFSCGLPTDGEVISGMRQDVNVLIFLDVRKALEESIKLYISDNKVILTEGFDGVVPPKYFERIESWPSRQPISF* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1688 353 Pfam RNA 2'-phosphotransferase, Tpt1 / KptA family 149 329 IPR002745 GO:0016740
Gso17g1688 353 Gene3D Glutaredoxin 19 95 - -
Gso17g1688 353 SUPERFAMILY Thioredoxin-like 26 85 IPR036249 -
Gso17g1688 353 SUPERFAMILY ADP-ribosylation 151 331 - -
Gso17g1688 353 MobiDBLite consensus disorder prediction 108 144 - -
Gso17g1688 353 Gene3D - 253 348 IPR042081 -
Gso17g1688 353 PANTHER PUTATIVE PHOSPHOTRANSFERASE 131 353 IPR002745 GO:0016740
Gso17g1688 353 Pfam Glutathione S-transferase, N-terminal domain 33 83 IPR004045 -
Gso17g1688 353 Gene3D - 147 227 IPR042080 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1688 Gso-Chr17 31857191 31871349 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1688 36 85 Glutathione S-transferase Gene Family AT5G41210 58.000 1.28e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1688 K10669 - gmx:100795797 514.227