Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1683 ATGTGTTCCCATAGCCTCATTTTCCATGCTAACTTGTTTCTTCTGCTGCTAATAGTTGGTTGTCATGCTCAACTTCGAGTTGATTACTACAAAAACACATGTCCAAATGTTGAATCGATTGTACGAAGTGCGGTTGAGAAGAAACTTCAGCAGACATTTGTGACAGCTCCTGCTACACTTAGGCTCTTCTTCCATGATTGTTTTGTTAGGGTCAGAATAGTTACAACTGGATGTGATGCATCTGTGATGCTAGCTACAAGAAACAACACATCAGAGAAGGATAATCCTATAAATCTTTCACTAGCTGGTGATGGATTTGACACTGTGATCAAAGCCAAGGCTGCGGTTGACAGTGTACCTGGCTGCCAGAATAAGGTTTCATGTGCTGACATATTGGCATTGGCAACTAGAGACGTCATAGCATTGGCAGGAGGACCATCTTATGCAGTAGAGTTGGGAAGGCTAGATGGGAGAGTCTCAACAAAAGCCAGTGTTAGACACCATCTACCTCATCCTGAATTCAAACTAGAACAGCTGAACCAAATGTTTGCTTCACATGGCCTCACCCTTACGGATCTAGTTGCTCTATCAGGAGCACATACAATCGGGTTCTCTCACTGCAGCCAGTTCTCCAAACGGATTTACAACTTCAGAAGAAGGAAAAGCATTGATCACACACTGAATCCTACGTATGCAAAACAGCTCCAGCAAGTGTGTCCAAAAAATGTGGACCCCAGATTAGCCATTGACATGGACCCAGTTACACCTAGGACATTTGATAACCAATACTACAAGAATCTTCAGCAAGGAAGAGGACTCCTTGCCTCTGATCAAGCTTTGTTTACTCATAAAAGAACAAGAGACCTAGTGAACTTATTTGCATCCAACAACACAGCCTTTGAAGCTTCTTTTGTAAGTGCCATGATGAAGCTAGGACGGATTGGGGTCAAAACGGGAAACCAGGGTGAAATTAGGCATGATTGCACAATGATTAACTGA 999 0.4294 MCSHSLIFHANLFLLLLIVGCHAQLRVDYYKNTCPNVESIVRSAVEKKLQQTFVTAPATLRLFFHDCFVRVRIVTTGCDASVMLATRNNTSEKDNPINLSLAGDGFDTVIKAKAAVDSVPGCQNKVSCADILALATRDVIALAGGPSYAVELGRLDGRVSTKASVRHHLPHPEFKLEQLNQMFASHGLTLTDLVALSGAHTIGFSHCSQFSKRIYNFRRRKSIDHTLNPTYAKQLQQVCPKNVDPRLAIDMDPVTPRTFDNQYYKNLQQGRGLLASDQALFTHKRTRDLVNLFASNNTAFEASFVSAMMKLGRIGVKTGNQGEIRHDCTMIN* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1683 332 ProSiteProfiles Plant heme peroxidase family profile. 24 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 CDD secretory_peroxidase 24 328 IPR033905 GO:0004601|GO:0042744
Gso17g1683 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Gso17g1683 332 SUPERFAMILY Heme-dependent peroxidases 24 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 Gene3D Peroxidase, domain 2 170 311 - -
Gso17g1683 332 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 PANTHER PEROXIDASE 4 332 - -
Gso17g1683 332 Pfam Peroxidase 41 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1683 332 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Gso17g1683 332 Gene3D - 28 332 - -
Gso17g1683 332 PANTHER - 4 332 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1683 Gso-Chr17 31605841 31608484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1683 23 332 Peroxidase AT4G30170 65.161 7.13e-153 430
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1683 K00430 - gmx:100793327 643.654