Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1676 ATGGAAGCTTCTAGAATAGAGAATTTGATTAGAGCCAAGAAATCATTGAAGATAAGCTTAGAGAAATCAAAATCGGTAGGTTTAGCATTAGAGAAGGCGGGGCCGAGGTTAGATGAAATTAGGGTGAGGCTTCCGTCGCTGGGATCGGCAGTGCGGCCGATTCGCGCCGAGAAGGACGCCCTCGCGGCGGTCGGCGGCCACATCAACCGTGCGGTGGGCCCCGCTGCAGCGGTGCTCAAGGTTTTCGACGCCGTCCACGGCCTCGAAAAGTCACTCCTGTCGGATCCCCGGACCGACCTGGCCGGATACTTGTCGGTGCTGAAGCGCCTCCAGGAGGCTCTGAGGTTCCTGGGAGACAATTGTGGGCTGGCCATACAGTGGTTGGAAGATATAGTTGAGTATTTGGAGGACAATTCTGTTGCTGATAAGGTTTATCTTGCGAATTTGAAGAAGGAGTTGAAGAATCTTCGCGAGTCGCAGCACGGGGAGCTTGATGGAGGGTTGCTGGATGCTGCATTGGGTAAATTGGAGGATGAGTTTAGGTTGCTGTTGAGTGAGAATAGTGTGCCGTTGCCTATGGCGTCCGCGAGCGGGGATCAGGCGTGCATTGCGCCATCACCATTGCCGGTGTCGGTTGTTCACAAGCTGCAGGCGATTCTCGGGAGGTTGATTGCCAATGACAGGCTGGATAGGTGTGTGGGGATTTATGTTGAGGTGAGGAGTTCGAATGTGAGGGCGAGTTTGCAGGCGCTGAATTTGGATTACCTTGAGATTTCTTTGTCGGAGTTTAATGATGTGCAGAGCATTGAGGGGTATATTGCTCAGTGGGGGAAGCATTTGGAGTTCGCAGTGAAGCACTTGTTTGAGGCCGAGTATAAGCTTTGCAATGATGTGTTTGAGAGGATTGGGTTGGATGTGTGGATGGGTTGCTTTTCAAAGATTGCTGCACAGGCTGGTATACTCGCTTTTCTTCAGTTTGGGAAGACGGTCACGGAGAGTAAGAAGGACCCTATTAAGCTTTTGAAGTTGTTGGATATTTTCGCGTCGTTGAATAAGTTGAGGCTGGATTTCAACCGGCTTTTTGGTGGTGCGCCGTGTGTTGAGATACAGAATTTGACAAGGGATCTTATTAAGAGCGTGATTGATGGGGCTGCGGAGATTTTTTGGGAGCTTTTGGTTCAGGTGGAGTTGCAAAGGCCGAATCCACCCCCAATGGATGGTAATGTGCCGAGATTGGTGAGCTTTATCACTGATTACTGTAACAAGCTCCTTGGGGATGACTATAAACCAATACTGACTCAGGTCCTGATCATTCACAGAAGTTGGAAGCGCCAAAGCTTTCAGGAGAAACTCCTTGTCAACGAGATTTTGAACATAGTGAAGGCTGTTGAACAGAATGTGGAGACTTGGATCAAGGCTTATGATGATCCTATACTGTCCAACTTTTTTGCTATGAACAATCACTGGCATCTGTGCAAGCATTTGAAGGGGACAAAACTTGGGGAGCTCTTGGGGGATTCTTGGTTAAGGGAGCATGAACAGTATAAGGACTATTACTCTACCATCTTCTTGAGGGACAGTTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGTTGATTCTTTTCTCGGGAGGGCGTGCCACTGCCCGTGACCTGGTCAAGAAAAGGTTGAAGAAGTTCAATGAAGTTTTCGATGAGATGTATGCGAAGCAGACAAGTTGGATCATGCCAGAACGAGATCTGAGGGAGAAGACATGCCAGCTTATAGTGCAAGCGGTGGTGCCTGTTTACCGCAGTTACATGCAGAATTATGGTCCTTTGGTTGAGCAAGATGCTAGCTCTACAAAATATGCAAAGTACACAGTGCAGAAGCTGGAGGAAATGCTTTTGTGTCTATATCGGCCAAGACCTGTAAGACATGGCAGCTTGAGAAGTTCAACATTTAGTGCAAAATATGGGAATGGAGTACCCGATCTTCGCAGAACAGCATCTGCAGTTGTGTAA 2007 0.4853 MEASRIENLIRAKKSLKISLEKSKSVGLALEKAGPRLDEIRVRLPSLGSAVRPIRAEKDALAAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRTDLAGYLSVLKRLQEALRFLGDNCGLAIQWLEDIVEYLEDNSVADKVYLANLKKELKNLRESQHGELDGGLLDAALGKLEDEFRLLLSENSVPLPMASASGDQACIAPSPLPVSVVHKLQAILGRLIANDRLDRCVGIYVEVRSSNVRASLQALNLDYLEISLSEFNDVQSIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAPCVEIQNLTRDLIKSVIDGAAEIFWELLVQVELQRPNPPPMDGNVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVNEILNIVKAVEQNVETWIKAYDDPILSNFFAMNNHWHLCKHLKGTKLGELLGDSWLREHEQYKDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMYAKQTSWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSTKYAKYTVQKLEEMLLCLYRPRPVRHGSLRSSTFSAKYGNGVPDLRRTASAVV* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1676 668 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 5 657 - -
Gso17g1676 668 Pfam Exo70 exocyst complex subunit 275 630 IPR046364 GO:0000145|GO:0005546|GO:0006887
Gso17g1676 668 Gene3D Exocyst complex component Exo70 76 641 - -
Gso17g1676 668 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 657 IPR004140 GO:0000145|GO:0006887
Gso17g1676 668 SUPERFAMILY Cullin repeat-like 78 634 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1676 Gso-Chr17 31331752 31334903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1676 6 668 EXO70 exocyst subunit family AT4G31540 73.855 0.0 1035
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1676 K07195 - gmx:100796139 1297.34