Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1673 ATGGCTGTGGAACTCATGGGGTTCCCAAAACTAGACGAACAAAAGGCCATTCAAGAAGCCGCATCAGAAGGCCTCAAGGGCATGAAACACCTGATCCGAACCCTTTCCAACCAACCCTCTCACTTAAACACCGAACTTACCGACGTTACCGTTTCAAAGTTCAAGAAACTTATTTCACTCTTAAATCGAACCGGCCACGCCCGGTTCAGACGCGCCCCGGTTCAGTACTCATCTCCACACGCACCCGTTCACAACACTAACGCTTCCACCTCATCAATTCAACTCCCTCCTCCGCCGCAAAACCCTAATATTCCCGCGCTGGCGCAGTTTCCTACTCCGGCGCCGGTGGCCGTGCACCACACGCCGGTGACGCTCGATTTCACGAAGCCGCACAACGCGCTTCTGAGCTCCAACGCCAAATCCGTCGAGCTCGAGTTCTCGAAGGAAACCTTCAGCGTTTCCTCTAACTCCTCTTTCATGTCCTCCGCGATCACCGGCGACGGCAGCGTCTCCAATGGGAAGATTTTCCTCGCGCCACCGGCGACCTCCGCCGGAAAACGTCCGGCGTTCAAGAAGCGGTGCCACGAACACCGCGAACACTCCGACGATGTCTCCGGCAACAGCAAGTGCCACTGCGTTAAGCGAAGGAAAAATAGGGTGAAGAGCACTGTGAGAGTGCCGGCGATTAGTTCAAAAGTCGCCGATATTCCACCGGACGAGTACTCGTGGAGGAAGTACGGTCAGAAACCGATCAAGGGTTCCCCATACCCAAGGGGTTACTACAAGTGCAGCACGATTAGAGGGTGCCCAGCGAGGAAGCACGTGGAGCGCGCACCAGACGATCCTGCAATGCTGATAGTGACGTACGAGGGGGAGCACAGGCACGCGGTTCAGGCTGCGATGCAGGAGAACGCAGCCGGGGTGGTGGGGTTGGTGTTCGAGTCAACGTAG 951 0.5647 MAVELMGFPKLDEQKAIQEAASEGLKGMKHLIRTLSNQPSHLNTELTDVTVSKFKKLISLLNRTGHARFRRAPVQYSSPHAPVHNTNASTSSIQLPPPPQNPNIPALAQFPTPAPVAVHHTPVTLDFTKPHNALLSSNAKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKIFLAPPATSAGKRPAFKKRCHEHREHSDDVSGNSKCHCVKRRKNRVKSTVRVPAISSKVADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTIRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGVVGLVFEST* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1673 316 ProSiteProfiles WRKY domain profile. 232 298 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1673 316 Pfam Plant zinc cluster domain 191 235 IPR018872 -
Gso17g1673 316 SMART WRKY_cls 237 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1673 316 MobiDBLite consensus disorder prediction 75 95 - -
Gso17g1673 316 Pfam WRKY DNA -binding domain 239 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1673 316 Gene3D WRKY domain 221 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g1673 316 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 314 IPR044810 GO:0003700
Gso17g1673 316 SUPERFAMILY WRKY DNA-binding domain 235 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g1673 316 MobiDBLite consensus disorder prediction 79 94 - -
Gso17g1673 316 PANTHER WRKY PROTEIN 12 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1673 Gso-Chr17 31275153 31278103 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1673 1 315 WRKY Transcription Factor Family AT2G24570 59.467 2.18e-113 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso17g1673 WRKY 1.1e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1673 - - gmx:100791219 615.92