Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1663 ATGCGATCTGCTTCTCGAGCTGCCCCTGCCTTCTCCCCTCTACAAAACCAGCTTAGTCATGCCAGTGCTAGGTCAGACCATTCAGAACCACGTGGGCCTCTGGTTAATGGTGCCAAAGGACCTGAAAGGAGGTCCTTTGAGGCACCACCCCGTAGATCACAGGATGCACCCCGTAAATCAAATGATGGAACAACAGATTCCTTCAGGTCACCATTCACTAGGAGAGGTATGTATGACAAGTCATATGGAGAAATTTCAGTGCCAGATTCTGACATAAGCTTTGTAAGCTCTAGAAGGCCAAGCACAGATCCCTTATTCCCTTCATTGTATAACAACAACAACAACAACCACTCGGAGACAGGAATATCCAACCCCCGGCTATCCTATAGCTCTGACACTGATGGAAATAACTATAGCTTTGAGTCTATGCATTTTGGAAGGAGGTCTATGGATATCAGCTCCGACTTCTCATCCTTTTCACAAGAGAGTGAGGGCTTGTCATCTTCTGCATTACGGGGTGTGGATGACGTGGAGGCTGAAATGAGAAGACTGAAGTTGGAGCTCAAGCAAACAATAGAATTGTATAACAATGCCTACAAAGAAGCACTCACGGCTCAACAAAAGGCTGTGGAACTCCAGCGCTGGAAATTAGAGGAAGAGAGGAGATTGGAGGAGGCAAAGCTCGCCGAAGAAGCTGCATTGGCAGTTGCAGAAAAGGAGAAGGCAAGATCGAAAGCAGCCACGGAGAGTGCTGAGGCACAGCAGAGGATTGCAGAACTGGAAGCACAGAAGAGAATCAATGCAGAAATGAAAGCATTTAAGGAAGCAGAAGAAAAAAGAAAAGCAGTGGATGCTTTATCAAACAATCATGTGAGGTATAGAAAGTACACAATAGAGGAGATTGAAGCTGCAACCAATTTTTTTACTGAGTCACAGAAGATTGGAGAAGGGGGTTATGGTCCAGTTTATAAGTGCCATCTGGACCATACACCCGTGGCAGTAAAGGTTCTACGTCCTGACGCAGCACAAGGAAGGTCACAGTTTCAAAGAGAGGTTGAGGTATTGAGTTGCATTAGGCATCCAAACATGGTTCTTCTCCTAGGAGCCTGCCCTGAGTACGGCTGCCTTGTATATGAGTACATGTCAAACGGAAGCTTAGATGACCGCCTCTTCTGCCGAGGAAACACTCACCCAATTCCATGGCAGTTGAGGTTCAGAATTGCAGCTGAAATTGGCACAGGCTTGTTGTTCCTCCACCAGACCAAACCCGAGCCTCTTGTGCATAGAGACCTCAAACCAGCCAACATCTTGCTGGACCGAAACTATGTTTCCAAGATCAGTGACGTAGGTTTGGCCAGGCTGGTTCCACCCTCTGTAGCAGACACTGTGACACAGTATAGGATGACATCCGCAGCTGGAACATTCTGTTACATAGACCCTGAGTACCAGCAGACAGGAATGCTTGGAGTGAAATCTGACATATACTCTCTTGGGATCATTTTCTTGCAACTTTTGACAGCAAGCCCTCCAATGGGTTTGACTCATCATGTTGGGAGAGCCATTGAGAAGGGCACATTTGCTGATATGTTGGATCCAAAAGTGTCTGGCTGGCCGGTAGAGGATGCCTTGAGCTTGGCAAAGATCGGTATCCGGTGTGCCGAACTGAGGAGGAGAGACAGACCTGATCTTGGCAAGGAAGTGCTGCCTGAACTAAACAGGCTAAGAGAACTTGCTGAGAACAATGATCATCATTCAATGTTTAGTGGCTATGCTAGCCCATCCAATCAGAGCCAAGTTTCTCTTCAGCTGGATGGAGCCAGTTCTCCACTTGCCTATTCTGGGGAGAGCATAAGAAACGCATCAAGTCCTGTTTGA 1875 0.472 MRSASRAAPAFSPLQNQLSHASARSDHSEPRGPLVNGAKGPERRSFEAPPRRSQDAPRKSNDGTTDSFRSPFTRRGMYDKSYGEISVPDSDISFVSSRRPSTDPLFPSLYNNNNNNHSETGISNPRLSYSSDTDGNNYSFESMHFGRRSMDISSDFSSFSQESEGLSSSALRGVDDVEAEMRRLKLELKQTIELYNNAYKEALTAQQKAVELQRWKLEEERRLEEAKLAEEAALAVAEKEKARSKAATESAEAQQRIAELEAQKRINAEMKAFKEAEEKRKAVDALSNNHVRYRKYTIEEIEAATNFFTESQKIGEGGYGPVYKCHLDHTPVAVKVLRPDAAQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEYMSNGSLDDRLFCRGNTHPIPWQLRFRIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPPSVADTVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQLLTASPPMGLTHHVGRAIEKGTFADMLDPKVSGWPVEDALSLAKIGIRCAELRRRDRPDLGKEVLPELNRLRELAENNDHHSMFSGYASPSNQSQVSLQLDGASSPLAYSGESIRNASSPV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1663 624 ProSiteProfiles Protein kinase domain profile. 308 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1663 624 MobiDBLite consensus disorder prediction 44 59 - -
Gso17g1663 624 Coils Coil 174 263 - -
Gso17g1663 624 SUPERFAMILY Protein kinase-like (PK-like) 289 563 IPR011009 -
Gso17g1663 624 MobiDBLite consensus disorder prediction 1 98 - -
Gso17g1663 624 PANTHER OS02G0152300 PROTEIN 1 619 - -
Gso17g1663 624 Gene3D Transferase(Phosphotransferase) domain 1 381 592 - -
Gso17g1663 624 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 1 619 - -
Gso17g1663 624 Gene3D Phosphorylase Kinase; domain 1 275 380 - -
Gso17g1663 624 MobiDBLite consensus disorder prediction 9 23 - -
Gso17g1663 624 Pfam Protein kinase domain 308 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1663 624 SMART serkin_6 308 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1663 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1663 Gso-Chr17 30835560 30841521 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1663 1 601 Receptor kinase-like Gene Family AT1G78940 57.929 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Gso17g1663 Pkinase 3.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1663 - - gmx:100787522 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1086 14 19495142 19504672 Gso17g1663 17 30835560 30841521 GST