Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1662 ATGGCTCTTAGAAGAGCATATTATTGCCTTCTTATGCTGTTGGTGTTGGCCAATATTTGTTTTGTGCCATTGTTGGGAGACACAAATGCTCAAATTTTGATGAGGTTCAAAGCTTCCTTGTCCAATAACAATGCCTTAAACAACTGGGTGAACGAGTCTAGTTTATGTAGTTGGAGAGGTTTGTTATGCAACCACACTGACCAAACATTTTATGGTTTGAGACTAGAGAATATGAGTCTAGGGGGGAACATTGACGTAGACACCTTGTTTGAATTGCCAACTTTGACAAGCTTTAGTGTCATGAACAATACATTTGAGGGTCCAATTCCTGAGTTCAAAAAGCTTGTGAAGTTAAGGGCATTGTTTCTGTCCAATAACAAGTTCTCTGGTGATATTCCAGATGATGCTTTTGAGGGCATGACAAAACTGAAAAGGGTTTTCTTGGCAGAAAATGGCTTCACGGGTCATATTCCTAAGTCACTTGCTAACTTGCCTAGACTTTGGGATTTGGACTTGCGAGGGAACAGTTTTGGAGGCAATATACCAGAGTTTCGACAAAAGGTTTTCAGAAATTTTAATTTGTCAAATAACCAATTGGAGGGTCCAATACCAAAAGGCTTAAGCAACAAGGATCCAAGCTCATTTGCTGGCAACAAAGGCCTATGTGGAAAACCGATGAGTCCGTGCAATGAGATTGGCCGCAACGAGTCAAGATCAGAGGTTCCAAACCCTAATTCACCTCAAAGAAAGGGAAACAAACATAGAATCCTTATAACTGTCATTATAGTGGTGGCAGTGGTTGTTGTTGCTTCAATAGTAGCACTTCTATTTATCCGTAACCAAAGGAGAAAAAGGTTAGAACCCTTAATATTAAGCAAGAAGGAGAATTCCAAGAACAGTGGAGGCTTCAAGGAGTCACAATCATCCATTGATCTGACAAGTGATTTCAAGAAGGGTGCTGATGGGGAATTGAACTTTGTTAGGGAAGAGAAAGGGGGCTTTGATTTGCAAGACCTGCTTAGAGCTTCAGCTGTGGTTCTTGGTAGTGGCAGTTTCGGGTCCACATACAAGGCCATGATTTTGAATGGACCAACAGTCGTTGTGAAGAGGTTTAGGCACATGAACAACAATGTCGGGAAACAGGAGTTCATTGAGCACATGAAAAGGCTTGGAAGTTTGACACACCCTAATCTTCTCCCTCTTGCTGCATTCTACTACCGAAAAGAAGACAAGTTTTTGATTTATGACTATGCTGAAAATGGTAGCTTGGCCAGTCATCTACATGGTAGAAATAACTCAATGCTAACCTGGTCAACCCGTTTGAAAATCATAAAAGGAGTAGCTAGAGGCTTAGCCTACCTCTATGAAAGCCTCCCTAGCCAAAACCTTCCACATGGTCATCTCAAGTCCTCCAATGTGATTTTGGACCATTCATTTGAGCCACACTTGACAGAGTATGGCCTTGTGCCAGTGATGAGCAAGAGCCACGCTCAGCAGTTCATGGCAGCCTACAAGGCCCCAGAAGTGATCCAATTTGGGAGGCCTAATGTGAAAAGTGATGTGTGGTGTCTTGGTATCATGATTCTAGAGCTACTAACAGGAAAATTCCCAGCAAATTATCTGAGGCATGGGAAGGGTAGGAACAATAATGCCGACTTGGCAACATGGGTGGATTCAGTAGTGAGAGAAGAGTGGACTGGTGAGGTGTTTGATAAAGACATTATGGGGACCAGGAATGGGGAGGGTGAGATGTTGAAGTTACTGAGGATTGGAATGTTTTGCTGCAAATGGAGTGTGGAGAGTAGGTGGGATTGGAGGGAGGCATTGGGAAAGATTGAGGAGTTAAAGGAGAAGGATAGTGATGAGGAGTACTACTCTTCTTATGTCAGTGAAGGGGATTTGTATTCAAGGACTATGACTAAAGATGAGTTCTCTATTTCTGTCACTAATTGA 1953 0.4245 MALRRAYYCLLMLLVLANICFVPLLGDTNAQILMRFKASLSNNNALNNWVNESSLCSWRGLLCNHTDQTFYGLRLENMSLGGNIDVDTLFELPTLTSFSVMNNTFEGPIPEFKKLVKLRALFLSNNKFSGDIPDDAFEGMTKLKRVFLAENGFTGHIPKSLANLPRLWDLDLRGNSFGGNIPEFRQKVFRNFNLSNNQLEGPIPKGLSNKDPSSFAGNKGLCGKPMSPCNEIGRNESRSEVPNPNSPQRKGNKHRILITVIIVVAVVVVASIVALLFIRNQRRKRLEPLILSKKENSKNSGGFKESQSSIDLTSDFKKGADGELNFVREEKGGFDLQDLLRASAVVLGSGSFGSTYKAMILNGPTVVVKRFRHMNNNVGKQEFIEHMKRLGSLTHPNLLPLAAFYYRKEDKFLIYDYAENGSLASHLHGRNNSMLTWSTRLKIIKGVARGLAYLYESLPSQNLPHGHLKSSNVILDHSFEPHLTEYGLVPVMSKSHAQQFMAAYKAPEVIQFGRPNVKSDVWCLGIMILELLTGKFPANYLRHGKGRNNNADLATWVDSVVREEWTGEVFDKDIMGTRNGEGEMLKLLRIGMFCCKWSVESRWDWREALGKIEELKEKDSDEEYYSSYVSEGDLYSRTMTKDEFSISVTN* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1662 650 ProSiteProfiles Protein kinase domain profile. 341 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1662 650 Gene3D Transferase(Phosphotransferase) domain 1 418 633 - -
Gso17g1662 650 Gene3D Ribonuclease Inhibitor 137 233 IPR032675 -
Gso17g1662 650 SUPERFAMILY L domain-like 53 209 - -
Gso17g1662 650 MobiDBLite consensus disorder prediction 201 251 - -
Gso17g1662 650 Gene3D Phosphorylase Kinase; domain 1 307 417 - -
Gso17g1662 650 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 626 - -
Gso17g1662 650 PANTHER LRR RECEPTOR-LIKE KINASE 7 626 - -
Gso17g1662 650 Pfam Leucine rich repeat 117 176 IPR001611 GO:0005515
Gso17g1662 650 MobiDBLite consensus disorder prediction 232 251 - -
Gso17g1662 650 Pfam Protein kinase domain 346 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1662 650 ProSitePatterns Protein kinases ATP-binding region signature. 347 369 IPR017441 GO:0005524
Gso17g1662 650 Pfam Leucine rich repeat N-terminal domain 30 64 IPR013210 -
Gso17g1662 650 Gene3D Ribonuclease Inhibitor 27 136 IPR032675 -
Gso17g1662 650 SUPERFAMILY Protein kinase-like (PK-like) 346 615 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1662 Gso-Chr17 30826094 30830621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1662 6 633 Receptor kinase-like Gene Family AT5G35390 46.779 0.0 553
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso17g1662 Pkinase 9.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1662 - - gmx:100786980 1267.29