Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1659 ATGGAGAGGGTCCTTGGAGGAAAGTTTAAAGTCGGTAAAAAAATTGGGAGCGGATCATTCGGTGAAATTCACATTGGGGCACATATCGAGACTTCTGAAATTGTGGCCATCAAGATGGAGAACAGGAAAACCAATCAGCCACAGCTACAGTTTGAGGCCAAGTTATATAGTACTCTTCAAGGAGGAAGTGGTATTCCAAGAATGAAATGGTGTGGTACTGATGGAGACAGCAATGTTCTTGTTATTGAACTTCTCGGACCGAGTCTTGAAGACCTCTTTTTCTTCTGTGGGAATAAATTTTCACTCAAAACAGTTTTGATGTTGGCTGATCAGTTGCTTACAAGGATAGAGTACTTGCACTCCAAAGGATTTTTGCATAGGGATATCAAACCGGATAACTTCCTTATGGGTCTTGGGAAGAAAGCAAATCAGGTTTATATGATTGATTTTGGACTAGCAAAAGAATATAGGGACCCTTTCACAAATAAGCATATCCCTTACAGAGAGAACAAAGGCTTAACAGGGACTGCACGTTATGCAAGTTACAATGCTCACTCAGGAATTGAGCAAAGTCGTCGAGATGATTTGGAGTCTCTTGGCTATGTTTTAATGTACTTTTTAAGAGGAAGCTATGAAGGGCTTGACTTCTTGGTTCTTGCATTTTTTAGCCTTCCTTGGCAGGGTTTGCAAGCTGTCACCAAAAGGCAAAAATATGACAAAATTTGCAAAAAGAAGTTATCAACTCCCATTGAGATACTATGCAAGTCATATCCTGTGGAATTTGCTTCTTACTTTCATTACTGCCGCTCCTTGACATTTGATCAACGGCCAGATTATGGTCTTTTAAAGCGCCTGTTTCGTAATTTGTTCACTCGTGCAGGATATGATTCTGACTATTTATTTGACTGGACCATTCTAAAATATCAACAGATGCAACAGGAAAAGACACAAAGTCAACCACCTGCTCCACTAGCTGTGCCTACCAGTCTTGAACCAGTGGATGAGGATAATCATAAAGGAGTCAATGATTCCATTAAAATTGCTGTGGCAACACCAAAAGTCAATGTTGATCATCAACGTGTTTTTAAGACAACGGCATCTAATGTTCAGAATCTTAATGCCAAGATTCCAGAGAAACATATTGTGAACAATGGTTCATCTGTGCCAACTGCTATGCCCAGAGTTTCCATAGAAAATGCCACAAAACAAGTAAGGCCTGCAGGAACCTCAAATGTGGGTCATGGATTAGGGAATAAGACTGGTGCTTCAGGATGCATTGTTCCTTCACTACGCCGAACTTCGTCAACCAGACAATAG 1317 0.4055 MERVLGGKFKVGKKIGSGSFGEIHIGAHIETSEIVAIKMENRKTNQPQLQFEAKLYSTLQGGSGIPRMKWCGTDGDSNVLVIELLGPSLEDLFFFCGNKFSLKTVLMLADQLLTRIEYLHSKGFLHRDIKPDNFLMGLGKKANQVYMIDFGLAKEYRDPFTNKHIPYRENKGLTGTARYASYNAHSGIEQSRRDDLESLGYVLMYFLRGSYEGLDFLVLAFFSLPWQGLQAVTKRQKYDKICKKKLSTPIEILCKSYPVEFASYFHYCRSLTFDQRPDYGLLKRLFRNLFTRAGYDSDYLFDWTILKYQQMQQEKTQSQPPAPLAVPTSLEPVDEDNHKGVNDSIKIAVATPKVNVDHQRVFKTTASNVQNLNAKIPEKHIVNNGSSVPTAMPRVSIENATKQVRPAGTSNVGHGLGNKTGASGCIVPSLRRTSSTRQ* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1659 438 PANTHER CASEIN KINASE-RELATED 1 422 - -
Gso17g1659 438 Pfam Protein kinase domain 9 209 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1659 438 MobiDBLite consensus disorder prediction 406 438 - -
Gso17g1659 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Gso17g1659 438 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 422 - -
Gso17g1659 438 SMART serkin_6 9 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1659 438 SUPERFAMILY Protein kinase-like (PK-like) 5 303 IPR011009 -
Gso17g1659 438 ProSiteProfiles Protein kinase domain profile. 9 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1659 438 Gene3D Transferase(Phosphotransferase) domain 1 1 348 - -
Gso17g1659 438 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1659 Gso-Chr17 30463139 30472822 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1659 4 209 CBL-interacting serine-threonine protein kinases AT4G14580 27.854 1.67e-12 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Gso17g1659 Pkinase 1.9e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1659 K08960 - gmx:100782913 854.358