Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1606 ATGTCTTCTGTGGATCTAAAGAAATCTAACAAAATAAGAGAAATTGTTAGACTGAAAGAGATCCTCAAGAAATGGAGAAAAATAGCCAACTCATCAAAAAGCACTACCACTATCGCCACGGCTACCTCTACCACAAGCAAGAGCATGAAGTTTCTCAAGAGAACACTTTCCCTATCAGAACGTGAAGGAGGGTCAAGCAATGTTGTCCCAAAAGGGTACCTAGCTGTTTGTGTTGGTGAAGAGCTCAAGAGGTTCACTATACCAACTGAACATTTGGGTCACCAAGCCTTTCAGATTCTCCTCAGAGAAGCAGAAGAAGAATTCGGCTTTCAGCAAACGGGTGTTCTGAGGATTCCTTGTGAAGTTGCAGCTTTTGAGAGCATCTTGAAGATGGTGGAAGGAAAGGAGGACATGTTTTCATCCCAAGAATGTAGACTTAGCATTGAAGAGATGATGATTGAGTACTGCTCAGAAAACCAACTTGCTTATTCTCACCATCCTCAAAGTCCATTGTGCAGATAG 522 0.4215 MSSVDLKKSNKIREIVRLKEILKKWRKIANSSKSTTTIATATSTTSKSMKFLKRTLSLSEREGGSSNVVPKGYLAVCVGEELKRFTIPTEHLGHQAFQILLREAEEEFGFQQTGVLRIPCEVAAFESILKMVEGKEDMFSSQECRLSIEEMMIEYCSENQLAYSHHPQSPLCR* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1606 173 Pfam Auxin responsive protein 24 132 IPR003676 GO:0009733
Gso17g1606 173 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 173 IPR003676 GO:0009733
Gso17g1606 173 PANTHER SAUR FAMILY PROTEIN 8 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1606 Gso-Chr17 26106886 26107772 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1606 4 173 Calmodulin-binding Proteins AT2G24400 51.913 7.64e-56 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1606 K14488 - gmx:100779842 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g1097 14 21247311 21248100 Gso17g1606 17 26106886 26107772 GST
Gso4g0665 4 6483169 6484156 Gso17g1606 17 26106886 26107772 PCT
Gso6g0666 6 6143682 6144686 Gso17g1606 17 26106886 26107772 PCT