Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1595 ATGGAGTCCAAGTGGGGCGCCGCCGCCACCAGCATCATAGCGGCAAACTTCGACGACTTCAAGTGGATCGCCTCCATGTTCTATCCCGACGTTGCAAACGACAACGTCAAGCCATGCAAGCTCGATCCTTTCACCGACGAAGCTTTCCAAAACCTGGAGGCAGTAACCGCATCTTCAACATGTGGTGGAGTAACAGAAGATACCCTTGTCCACTCCCAAAACCTCACTCCCATTCAATCCACTATCTCTGCAACTATTGATTCTCTGTCTTCCATTTGTGTTGGGAGCCCATTGTCTGCTAATAAACCAAACGCGAGAGATAATCAAGTAAAAGGGGCCACCACCACTACAAGTGGTTCCTCACGTGAGCCATCTGATGAGGATGATGAAGCAGGTCCTTGTGAACAAAGCACAAACGCTATTGATGTGAAGCGCCTAAGAAGGAAGGTTTCTAATCGAGAGTCTGCAAGGAGGTCCAGGAGGAGAAAACAAGCCCATTTGGCTGACCTGGAGTGGCAAGTCGAACGGTTGAGACTTGAAAACGCAAACCTATTTAAGCAGCTTACAGATGCCAGCCAACAATTTCGTGAAGCTGATACAAATAATCGAGTCCTAAAATCAGATGTCGAAGCTTTGAGAGCTAAGGTGAAATTAGCTGAGGATATGATCACTCGTGGCACACTCACCCCTACCAACAACCAGATTCTTCAAAATCAGAGTCCACTAAACACCCCACCTCAACTCAACACGAATAATTTACGCCGCATGGGATATGTTTCGCCAACCTTCACCGTCCATGGGAATGATGCTACTGCTTCATATGGTGGTGGAATCACAGTTAGTGGACAAAATTCACCGCTTGGTGGGCTTGGAAACTTGGATAATATTCCATGCAGCGATTTCAATAGTGGAGTCAATAGCGATAATGCTGTGAGCTCTATGACTAGCATGTGGCCTTAA 960 0.4708 MESKWGAAATSIIAANFDDFKWIASMFYPDVANDNVKPCKLDPFTDEAFQNLEAVTASSTCGGVTEDTLVHSQNLTPIQSTISATIDSLSSICVGSPLSANKPNARDNQVKGATTTTSGSSREPSDEDDEAGPCEQSTNAIDVKRLRRKVSNRESARRSRRRKQAHLADLEWQVERLRLENANLFKQLTDASQQFREADTNNRVLKSDVEALRAKVKLAEDMITRGTLTPTNNQILQNQSPLNTPPQLNTNNLRRMGYVSPTFTVHGNDATASYGGGITVSGQNSPLGGLGNLDNIPCSDFNSGVNSDNAVSSMTSMWP* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1595 319 Coils Coil 202 222 - -
Gso17g1595 319 Coils Coil 160 194 - -
Gso17g1595 319 MobiDBLite consensus disorder prediction 100 121 - -
Gso17g1595 319 CDD bZIP_plant_GBF1 145 196 IPR045314 GO:0003700|GO:0006355
Gso17g1595 319 Gene3D - 143 200 - -
Gso17g1595 319 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 147 162 IPR004827 GO:0003700|GO:0006355
Gso17g1595 319 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 142 205 IPR004827 GO:0003700|GO:0006355
Gso17g1595 319 MobiDBLite consensus disorder prediction 100 136 - -
Gso17g1595 319 PANTHER BASIC LEUCINE ZIPPER 9 34 319 - -
Gso17g1595 319 PANTHER BASIC LEUCINE ZIPPER 63 34 319 - -
Gso17g1595 319 SUPERFAMILY Leucine zipper domain 144 194 IPR046347 GO:0003700|GO:0006355
Gso17g1595 319 Pfam bZIP transcription factor 143 191 IPR004827 GO:0003700|GO:0006355
Gso17g1595 319 SMART brlzneu 140 204 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1595 Gso-Chr17 24994363 25001552 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1595 67 319 bZIP Transcription Factor Family AT5G24800 47.692 6.61e-60 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso17g1595 bZIP_1 1.7e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1595 K25784 - gmx:100776831 615.15