Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1571 ATGGGGAAAAAAGGAAGTTGGTTTTCTGCAGTGAAGAAAGTTTTCAGTTCAGATTCCAAAAAAGACAAGAAAAAACAGAAAAGCGACAAGTCAAAGAAAGCAAGCAGTGACAAGGATGCAGAAGCAGCTGTTGTTCTTCCACCAATAGAAGATGCCAAATTAATTGAGGCAGAGAAGGAACAGAGCAAACATGCTGCTTCTTTGGCTTTTGCCACTGCTGTTGCTGCAGAGGCTGCTGTTGCCGCTGCTCAGGCTGCTGCCGAGGTTGTTCGTCTCACAAGTATGCCACATTACACTGGAAGGACTAAGGAAGAAATTGCAGCCATCAAGGTTCAGACTGCATTCCGTGGATATATGGCAAGAAGGGCATTGCGTGCGTTGAGAGGATTGGTGAGGTTGAAAACATTAGTACAAGGGCAATCTGTTAAACGGCAAGCTGCTAGCACCCTACGAAGCATGCAAACTCTAGCAAGATTACAGTCTCAGATTCGTGAAAGGAGAATTAGAATGTCCGAAGAGAACCAAGCTCTTCAGCGCCAACTACATCAGAAACATGAAAAAGAACTTGAGAAGTTGCGTGCTGCTGTTGGAGAAGAATGGGATGATAGCTCGCAGTCAAAGGAGCAAATTGAAGCAAAATTGTTGCACAGGCAAGAAGCTGCTTTGAGAAGAGAGAGAGCTTTGGCCTATTCATTCTCACATCAGCAAACATGGAAGGGCTCTTCAAAGTCATTAAATCCAACATTTATGGATCCAAACAATCCCCAATGGGGGTGGAGTTGGCTAGAGAGATGGATGGCTACTAGGCCATGGGATGGCCATAGCACTGTGGTGGATCACAATGACCATGCATCTGTGAAGAGTGCAGCGAGCCGTGCCGTGTCTGTAGGGCAAATCACCAAATTGTACTCTCTCCAAGATAAAAAACCTTCCCCTTTTGGCTCAAAAGCAAGAAGACCTGCCCCTCAAAGTTCCCATTCAAAGGCACCATCTACTAATGGAAAAGCAAGGCCATCAAGCTCAACAAAGGGTAGTAGTGTTTGGGGTGGAGATGAGGACTCAAGAAGCATGTTTAGTGTTCAGTCGGAGCGCTACCGCCGACACAGCATTGCAGGATCCTCAGTGAGAGATGATGATAGCCTTGCAAGCACACCTGCCATTCCAAGTTACATGGCAGCCACAAGCTCAGCAAAGGCCAGGTCCAAAATCATAAGGCATTCACCTGAAAAAAAAGGTGGTGGTGGTTCTGTTTCTGCAAGGAAGCGACTTTCTTTCTCACCCTCTTCTGCTGCTAATTCAAGAAGGCATTCTGATCCTCCTAAGGTGGAAATGGTTTACAATAAGGATGCTGCTGCGGCTACAGTAAGCAATGGAAGGGGAAGGTAG 1386 0.4632 MGKKGSWFSAVKKVFSSDSKKDKKKQKSDKSKKASSDKDAEAAVVLPPIEDAKLIEAEKEQSKHAASLAFATAVAAEAAVAAAQAAAEVVRLTSMPHYTGRTKEEIAAIKVQTAFRGYMARRALRALRGLVRLKTLVQGQSVKRQAASTLRSMQTLARLQSQIRERRIRMSEENQALQRQLHQKHEKELEKLRAAVGEEWDDSSQSKEQIEAKLLHRQEAALRRERALAYSFSHQQTWKGSSKSLNPTFMDPNNPQWGWSWLERWMATRPWDGHSTVVDHNDHASVKSAASRAVSVGQITKLYSLQDKKPSPFGSKARRPAPQSSHSKAPSTNGKARPSSSTKGSSVWGGDEDSRSMFSVQSERYRRHSIAGSSVRDDDSLASTPAIPSYMAATSSAKARSKIIRHSPEKKGGGGSVSARKRLSFSPSSAANSRRHSDPPKVEMVYNKDAAAATVSNGRGR* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1571 461 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Gso17g1571 461 MobiDBLite consensus disorder prediction 392 461 - -
Gso17g1571 461 MobiDBLite consensus disorder prediction 15 39 - -
Gso17g1571 461 Coils Coil 156 187 - -
Gso17g1571 461 SMART iq_5 103 125 IPR000048 GO:0005515
Gso17g1571 461 MobiDBLite consensus disorder prediction 421 435 - -
Gso17g1571 461 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Gso17g1571 461 PANTHER PROTEIN IQ-DOMAIN 1-LIKE 1 445 - -
Gso17g1571 461 MobiDBLite consensus disorder prediction 305 355 - -
Gso17g1571 461 MobiDBLite consensus disorder prediction 318 349 - -
Gso17g1571 461 MobiDBLite consensus disorder prediction 15 43 - -
Gso17g1571 461 PANTHER IQ-DOMAIN 5-RELATED 1 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1571 Gso-Chr17 24012300 24017928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1571 1 460 IQD Protein Family AT5G03040 48.755 3.98e-130 382
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1571 - - gmx:100809448 777.704