Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1569 ATGGGGAGGTTCGAAAACCATGTTGTCAAAGGAGGCATCAAGTTGCCAATTGGGTTCAGGTTTTGTCCCACCGATGAAGAGCTTCTCCTTCACTACCTCAAGAAGAAGGCGTTTGCTCAACAATTACCCGCTTCAGTCATTTCAGAGTTTGACGTGTTTCAGACTGAGCCATGGAAACTTCCAGGTGAATTGAGGGAAAATAGGTACTTTTTTAGCAATAGATCAAATGGAAACATCAAGAGACCTGCTGGTTCTGGGTGCTGGAAATCTGTAGGCAAAGAAAAACAAATCATCCATTCAGAGAGCAATCAAGTAATTGGGATGAAGGAAACACTGTTTTTTTGCAAAGGGTCCCATGAGACAAGAACTCAGTGGGTCATGCACGAATTGCGCCTTGTAGCTTCCTACCCATGTCAGATGCCAGTGGCAGATTTTGCTGTGTATCGCATATTTCAGAAAAACAAGATGAAGACAAGAAGATCACATGGGAAGAAGCCCTCTAGTAGCAGCAAACTTCAGAGACTTGTTGATGTTAAAGCTAGTTTCTTTGACTTCACTGTGGATTTTAATCATGACGATATAGGGCCTCCCACACCTTGTTCCCCATGTCTAAGTGAAGGCTGTAGTGAAATCTCCTCTAGCAAGTTAGATTAG 654 0.4312 MGRFENHVVKGGIKLPIGFRFCPTDEELLLHYLKKKAFAQQLPASVISEFDVFQTEPWKLPGELRENRYFFSNRSNGNIKRPAGSGCWKSVGKEKQIIHSESNQVIGMKETLFFCKGSHETRTQWVMHELRLVASYPCQMPVADFAVYRIFQKNKMKTRRSHGKKPSSSSKLQRLVDVKASFFDFTVDFNHDDIGPPTPCSPCLSEGCSEISSSKLD* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1569 217 Pfam No apical meristem (NAM) protein 16 132 IPR003441 GO:0003677|GO:0006355
Gso17g1569 217 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 15 164 - -
Gso17g1569 217 Gene3D NAC domain 24 158 IPR036093 GO:0003677|GO:0006355
Gso17g1569 217 SUPERFAMILY NAC domain 8 153 IPR036093 GO:0003677|GO:0006355
Gso17g1569 217 ProSiteProfiles NAC domain profile. 15 153 IPR003441 GO:0003677|GO:0006355
Gso17g1569 217 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 15 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1569 Gso-Chr17 23991869 23994511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1569 8 155 NAC Transcription Factor Family AT5G13180 49.359 2.86e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso17g1569 NAM 6.5e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1569 - - gmx:100815663 453.366