Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1563 ATGGGTTCTGAAACTTTTCTCGAAGTGATATTGGCAATCCTGCTACCTCCTGTTGGTGTTTTCCTCCGTTATGGCTGTGGCGTGGAGCTCTGGATAGATCTGGTGCTGACCATACTGGGATACATACCTGGGATTATATATGCAATTTATGTATTGATTGGATGA 165 0.4364 MGSETFLEVILAILLPPVGVFLRYGCGVELWIDLVLTILGYIPGIIYAIYVLIG* 55
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1563 54 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016021
Gso17g1563 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016021
Gso17g1563 54 PANTHER BNAA04G22250D PROTEIN 1 53 - -
Gso17g1563 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 53 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1563 Gso-Chr17 23667868 23668360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1563 1 54 RCI2 Gene Family AT2G38905 90.741 1.04e-28 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1563 - - gmx:100815133 110.923