Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1525 ATGGCTATGATTATGGATGCTGTTCTTGGAAAACTGCTTGATGAGCTGCTGAAAGAAGTTGTGAATGTGAAAGACAGGGCTGTGAAGTTCAGAGCCACCCTGATAACCTTAGAGTCAACCCTAAATAAAGTAGGAAGGTTGGCTAAACAGATTGATGGTCTTAACAATCAATTGAACAAACCAGCCGAGGAAATGAAAGAGCTGAAAGATAAGTTGGCGAAAGGGAAGAAACTCGTTATGGAGTGCTCCGAAATCCAGTGGTGGAATTGCTGCTATAAGGCCAACTACCAAGAGGAACTCGAGGCGTTGTACGAGTCGATCCGTTTGTACTTCAATCTGGATATGCAAGGTCTGATACTAACTAATGAGTTACAAAACCAGGTGATTCTGACCGAGATTCATGCAACAGTTATGGAAAGTGGTCCGAGAAGGACCGAATTGAAAGGCGTGTGTTCGCCTCCGGCCCCTCCGGCTTTCACGGTTGGCTTGGATGTTCATTTGAGGGAGATGAAGGTCAAGTTGCTGAATAACCACCACCATGCTGGATCTGTGCTCACGGTCACCGGAACACCAGGCTCAGGGAAGTCAACGTTGGTTAAAAAGTTTTGTTGTGATGAGGAAGTCAAAGGTATATTCAAGGAAAACATATTCTTCATCACCTTTGCGCAAAAGCCCAAGTTAAATACCATAGTGCAGAGACTGTTTCAACACAATGCTTGCCAGGTGCCAGAGTTTCAAAGTGACGATGATGCAGTTTATCAATTGGAAAATTTGCTGAAACAGATTGGGAAAAACCCAATACTGTTGGTCCTGGATGATGTTCCGTCCGAATCAGTGTCTCTTGTTGACAAATTTGTGTTCCAGATCCCAAAGTACAAGATTCTAGTGACCTCAAGAATCACAATTAGAGGATTTGACCAGCCATACGTGTTGAAATCACTCAACGAAGTCGATGCTATAAATTTATTTCGCCACTCTGCATCCCTGAATCAGAGTAGCTCTGACATTCCTGAGAATATTGTCAAAAAGATTGCGAGAGGGTGCAGTGGTTCTCCCTTGGCACTTATAGTGACTGGCAAATCACTAAGTCGTGAACCACCGTGGGCTTGGAACAACAGGGCTAAGAAACTGTCCAAGGGTCAACCAATTCTTGCTTTTAGTGCAGATGTGCTTACTTGTCTCCAAAAAAGCTTCGATGACTTGGATCCTAAGGTGGCTGAGTGTTTTAGGGACCTAAGCTTATTCCCCGAAGCCCAGAGGATACCTGCTGCTGCCCTTGTTGATATATGGGCAGAACTGCGTGATGAAGATGATGACAGCGCAATGGAGAATATCTATGAACTCGTCAAAAGGAACATGGCTGATATTGTTGTCACAAGGAATATTTCAAGTGGCACGATTGACTATAATTACCACTATGTTACACAACATGGTCTTCTTCGGGACCTAGCTATCCTTCAAACGAACAAGGAACTAATGAAGAAGAGGAATAGACTGATTATTGACGTAAGTGGTAACAATCTTCCCGATTGGTGGACTACACAGAATGAGTATCACATTGCAGCCCACTCACTATCCATATCAACTGATGACACATTCACTTCAGAATGGTGCAACTTGCAGGCATCTGAGGTTGAGGTTCTAGTGCTGAACCTTCGAGAAAAGAAGCGGTCGCTACCAATGTTCATGGAGAAAATGAATAAACTAAAAGTCCTGATAGTAACGAATTATGAGTTCTATCGCGCTGACTTGGAAAATTTTGAGCTGCTTGATAATCTGTCTAGTCTCAAAAGAATCAGATTAGAGAAGGTTTCAATTCCCTTCTTGAGCAACACTGGAGTGCAACTGAAGAATCTACACAAGTTCTCCTTTTTCATGTGCAATGTGAATGAAGCATTCAAAAATAGCACCATTCAAGTTTCAAAAGTGTTCCCAAATTTGGAGGAGATGAACATTGACTACTGTGATATGGTGGAATTGCCAATTGGGCTCTCTGATATTGTTTCCCTAAAGAAGCTAAGTATCACAAACTGTCACAAACTTTCTGCACTTCCTGAAGGAATTGGGAAGTTGGTCAATCTGGAATCACTAAGGCTTACTTCATGTACTAAATTAGAAGAGTTACCAGAATCAATCACAAGTCTTAGTAAACTGAACTTCCTTGACATCTCTGACTGCGTAAGCCTTAGTAAGTTACCAGAGAACATGGGAGAGTTGCGTAGTTTAGAAAATCTCAATTGCAGAGGTTGCACAAGATTGACTGATTTGCCATACTCAATCACGGAGCTTGAGAGCTTAAGCGCTGTGGTGTGTGATGAAGAGACTGCTGCATTATGGGAACCTTTCAAAACCATGCTTAGAGATCTAAAGCTTAAGGTGGCCCAAGTTGATTTCAATTTGAATTGGCTTTCATAG 2415 0.424 MAMIMDAVLGKLLDELLKEVVNVKDRAVKFRATLITLESTLNKVGRLAKQIDGLNNQLNKPAEEMKELKDKLAKGKKLVMECSEIQWWNCCYKANYQEELEALYESIRLYFNLDMQGLILTNELQNQVILTEIHATVMESGPRRTELKGVCSPPAPPAFTVGLDVHLREMKVKLLNNHHHAGSVLTVTGTPGSGKSTLVKKFCCDEEVKGIFKENIFFITFAQKPKLNTIVQRLFQHNACQVPEFQSDDDAVYQLENLLKQIGKNPILLVLDDVPSESVSLVDKFVFQIPKYKILVTSRITIRGFDQPYVLKSLNEVDAINLFRHSASLNQSSSDIPENIVKKIARGCSGSPLALIVTGKSLSREPPWAWNNRAKKLSKGQPILAFSADVLTCLQKSFDDLDPKVAECFRDLSLFPEAQRIPAAALVDIWAELRDEDDDSAMENIYELVKRNMADIVVTRNISSGTIDYNYHYVTQHGLLRDLAILQTNKELMKKRNRLIIDVSGNNLPDWWTTQNEYHIAAHSLSISTDDTFTSEWCNLQASEVEVLVLNLREKKRSLPMFMEKMNKLKVLIVTNYEFYRADLENFELLDNLSSLKRIRLEKVSIPFLSNTGVQLKNLHKFSFFMCNVNEAFKNSTIQVSKVFPNLEEMNIDYCDMVELPIGLSDIVSLKKLSITNCHKLSALPEGIGKLVNLESLRLTSCTKLEELPESITSLSKLNFLDISDCVSLSKLPENMGELRSLENLNCRGCTRLTDLPYSITELESLSAVVCDEETAALWEPFKTMLRDLKLKVAQVDFNLNWLS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1525 804 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 133 IPR008808 -
Gso17g1525 804 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Gso17g1525 804 Gene3D - 313 397 IPR042197 -
Gso17g1525 804 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 412 IPR027417 -
Gso17g1525 804 SUPERFAMILY L domain-like 477 766 - -
Gso17g1525 804 Gene3D - 398 485 IPR036388 -
Gso17g1525 804 PANTHER LRR AND NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1 803 - -
Gso17g1525 804 Gene3D - 148 303 IPR027417 -
Gso17g1525 804 PRINTS Disease resistance protein signature 184 199 - -
Gso17g1525 804 PRINTS Disease resistance protein signature 261 275 - -
Gso17g1525 804 PRINTS Disease resistance protein signature 348 362 - -
Gso17g1525 804 PRINTS Disease resistance protein signature 713 729 - -
Gso17g1525 804 Coils Coil 37 71 - -
Gso17g1525 804 Pfam NB-ARC domain 166 379 IPR002182 GO:0043531
Gso17g1525 804 Gene3D Ribonuclease Inhibitor 486 788 IPR032675 -
Gso17g1525 804 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 803 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1525 Gso-Chr17 20615453 20621938 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1525 161 720 WRKY Transcription Factor Family AT5G45050 21.747 7.18e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1525 - - gmx:100812310 1585.85