Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1518 ATGAATAGAGAAAGGACTCGAAAAGTTGAGTTATTCATGGAAGAGACGGCACAACAAGTAAAACGTCCTTTTGATGTTCCTGAAGAACCAGAATTCATTGTTGGGTTGGATGCACCATTGAGTGAGTTGAAAATGGAACTTCTTAAAGAAGGCGTGTCCATCATTGTGCTGACTGGTTTAGGTGGATCGGGAAAAACCACTTTGGTTACAAAGCTTTGTTGGGATGAACTAGTCATAGGTAAATTCAAGGGAAATATTTTATTTGTCACCATCTCAAAAACGCCTAAGCTGAAGATTATCATCGAAAGACTATTTGAATATTATGGGTGTCAAGTGCCTGCGTTTCAAAGCGATGAAGATGCAGTTAATCATTTGGGAATTTTGCTGAGGAAAATTGATGTAAGTCCAATGTTGTTGGTCTTGGATGATGTTTGGCCTGGCTCAGAAGGCTTCATTGAGAAAGTCAAAGTTCAGATATCAGATTATAAAATTTTGGTGACTTCAAGGGTAGCATTTCCTAGATTTGGCACTCCATTTATCTTAAAAAATCTTGTTCATGAAGATGCAATGACCCTTTTTCGTCACCATGCACTCTTAGAAAAAAACAGCTCAAATATTCCTGAAGAAGTTGTCCAAAAGATTGTTAGACATTGTAAGGGTTTAAATTTACCGCTTGTCATAAAAGTGATTGGTAGATCACTAAGTAATCGACCATACGAGTTGTGGCAAAAGATGGTGGAGCAATTGTCACAAGGTCATTCTATACTTGATTCTAACACTGAATTACTTACTTCCTTCCAAAAGATCTTAGATGTCTTGGAAGATAATCCCACCATCAAAGAGTGCTTCATGGACTTAGCTTTATTTCCTGAAGACCAAAGAATTCCTGTTGCTGCTCTTGTTGATATGTGGGTTGAGTTGTATGGACTAGATAATGACGGCATAGAAACAGTGGCCATTGTCAACAAATTAGCTTCCATGAATCTGGTTAATGTCTTAGTAACAAGGAAAAATACCAGTGACACAGACAGTTACTACTACAATAACCATTTCATCATCCTTCATGATATCCTAAGAGACTTCGGAATTCATCAAAGCAACCAGGAACAAGTTGAACAGAGAAAAAGACTGATGATTGACATAACAGAAAATAAACCTGAATGGTGGCCTAGAGAAAAACAGATCCCTGCACAGACATTGTCTATATCAACTGATGAAACTTGCACATCATATTCGTCCCACCTGCAACCTGCTCAAGCTGAGGTTCTGATTTTAAACCTTCAAACTAATCAGTGCACCTTTCCAAAGTTACTGAAAGAAATGAGGAAACTAAAAGTTCTGATAGTCATGCATTATGGTTTCCATCCTTCTAAAATGAACAATTTAGAGTTGTTTGGCTCATTATCCCACCTTAAAAGAATCAGATTCGAGCGGATTTGGGTTCCTCCCTTTGTCACATTGAAGAATCTTAAAAAGTTATCCCTCTACTTGTGTAATACAAGACAGGCTTTTGGAAACAGAAACATGCTAATTTCATATGCTTTTCCAAATCTAGTAGATTTGAATGTTGACTATTGCAAAGATTTGGTAGAATTGCCTAAGGGGCTATGTGATATCACCACCTTGAAGATGCTCAGTATTACCAATTGCCATAAGCTCTCTGCATTACCTCAAGAAATTGGAAACTTGGACAATTTGAAACTTCGAAGGCTAAGTTCTTGTACTGATTTGGAAGAGATACCAAATTCTATTGGAAAACTTTCAAATCTAAGACATATGGACATCTCAAACTGCATTAACCTTCCAAATTTACCAGAGAACTTTGGTAATCTTTGCAATCTAAGAAATCTGTACATGACAAGTTGTGCAAGGTGTGAATTGCCACCCTCGATTGTCAATCTAAAGAATTTAAAGGAGGTGGTATGTGATGAAGAGACGACTGTTTCGTGGGAAGCTTTCAAAGATATGCTTCCTAATCTGAAGATATATGTTCCTCAAATTGATGTCAACTTGAATTGGCTTCATGAAATTCACTCCTAA 2040 0.3725 MNRERTRKVELFMEETAQQVKRPFDVPEEPEFIVGLDAPLSELKMELLKEGVSIIVLTGLGGSGKTTLVTKLCWDELVIGKFKGNILFVTISKTPKLKIIIERLFEYYGCQVPAFQSDEDAVNHLGILLRKIDVSPMLLVLDDVWPGSEGFIEKVKVQISDYKILVTSRVAFPRFGTPFILKNLVHEDAMTLFRHHALLEKNSSNIPEEVVQKIVRHCKGLNLPLVIKVIGRSLSNRPYELWQKMVEQLSQGHSILDSNTELLTSFQKILDVLEDNPTIKECFMDLALFPEDQRIPVAALVDMWVELYGLDNDGIETVAIVNKLASMNLVNVLVTRKNTSDTDSYYYNNHFIILHDILRDFGIHQSNQEQVEQRKRLMIDITENKPEWWPREKQIPAQTLSISTDETCTSYSSHLQPAQAEVLILNLQTNQCTFPKLLKEMRKLKVLIVMHYGFHPSKMNNLELFGSLSHLKRIRFERIWVPPFVTLKNLKKLSLYLCNTRQAFGNRNMLISYAFPNLVDLNVDYCKDLVELPKGLCDITTLKMLSITNCHKLSALPQEIGNLDNLKLRRLSSCTDLEEIPNSIGKLSNLRHMDISNCINLPNLPENFGNLCNLRNLYMTSCARCELPPSIVNLKNLKEVVCDEETTVSWEAFKDMLPNLKIYVPQIDVNLNWLHEIHS* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1518 679 Gene3D - 183 268 IPR042197 -
Gso17g1518 679 Gene3D - 12 172 IPR027417 -
Gso17g1518 679 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 20 665 IPR039203 GO:0050832
Gso17g1518 679 SUPERFAMILY RNI-like 425 661 - -
Gso17g1518 679 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 286 IPR027417 -
Gso17g1518 679 PRINTS Disease resistance protein signature 54 69 - -
Gso17g1518 679 PRINTS Disease resistance protein signature 131 145 - -
Gso17g1518 679 PRINTS Disease resistance protein signature 220 234 - -
Gso17g1518 679 PRINTS Disease resistance protein signature 585 601 - -
Gso17g1518 679 Pfam NB-ARC domain 40 254 IPR002182 GO:0043531
Gso17g1518 679 Gene3D Ribonuclease Inhibitor 392 678 IPR032675 -
Gso17g1518 679 Gene3D - 269 365 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1518 Gso-Chr17 20243469 20248476 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1518 456 640 Receptor kinase-like Gene Family AT1G28440 27.094 2.68e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1518 - - gmx:100805367 1356.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0771 5 17382363 17387508 Gso17g1518 17 20243469 20248476 GST
Gso1g1573 1 52382503 52387251 Gso17g1518 17 20243469 20248476 PCT
Gso11g0505 11 4499205 4504151 Gso17g1518 17 20243469 20248476 PCT
Gso17g1518 17 20243469 20248476 Gso1g1573 1 52382503 52387251 PCT
Gso17g1518 17 20243469 20248476 Gso11g0505 11 4499205 4504151 PCT