Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1515 ATGGAAGAGATGGCACAACAAGTAAAGCGTCCTTTTGGTGTTCCTGAAGAGCCAGAATTCACTGTTGGGTTGGATGCACCATTGAGGGAGTTGAAAATGGAACTTCTTAAAGAAGGTGTGTCCATCATTGTGCTGACTGGTTTAGGTGGATCGGGAAAAACCACTTTGGCTACAAAGCTTTGTTGGGATGAACAAGTCATAGGTTCATTCAAGGAAAATATTTTATTTGTCACCTTCTCAAAAACACCTAAGCTGAAGATTATCGTCGAAAGACTATTTGAATATTGTGGATATCAGGTGCCTCAGTTTCAAAGCGATGAAGATGTGGTTAATCAATCGGGACTTTTGCTGAGGAAAATTGATGCAAGTCCTATGTTGTTGGTCCTGGATGATGTCTGGCCTGGCTCAGAACCCTTAGTTGAGAAATTTAAGGTTCAGATGCCAGATTATAAAATTTTGGTGACTTCAAGAGTTGCATTTCCTAGATTTGGCTCTCCATACATCTTAAAACCTCTTGTTCATGAAGATGCAATGGCCCTTTTTTGTCACCACACTCTCTTAGGAAAAAACAGCTCAAATATTCCTGAAGAAGTTGTCCAAAAGATTGTTAGACATTGCAAGGGCTTACCGCTTGCCATTAAAGTGATTGGTAGATCACTAAGTAATCAACCTTACGAGTTGTGGCAAAAGATGGTGGAGAAATTGTCACAAGGTCATTCCATACTTGATTCTAACACTAAATTAGTTGCTTCCCTCAAAAAGATCTCAGATGTCTTGGAAGATAATTCCATCATCAAAGAGTGCTTCATAGACTTAGCTTTATTTCCTGAAAACCAAAAAATTCCTGTTGCTGCTCTTGTGGATATGTGGGTAGAGTTGTATGGACTAGATAATGATGGCATAGTAATGGCCAATGTCAACAAATTAGCTTCCATGAATCTGGCTAATGTCTTAGAAACAAGGAAAAATACAAGTGACACAGACAGTTACTACTACAATAACCATTTCATCATCCTTCATGGTATTCTAAGAGACATCACAATTTATCAAGGCACCCAGGAACAAGTTGAACTGAGAAAAAGACTTATGATTGGCATAACTGAAAATAAAACTGAATGGTGGCTAATTAGAGAAAAACAGCAAGGCATGATGATTCGCATATTGTCTATATCAACCGATGAAACTTGCACATCATATTGGTCCCATCTGCAACCAACTCAAGCCGAGGTTCTGATTTTAAACCTTCAAACTAGTCGGTACACCTTTCCAAAGTTCTTGAAAGAAATGAGTAAACTAAAAGTTCTGATAGTCATACGTCATGGTTTCCATCCTTCTGAAATGAAGAATTTTGAGTCGCTTGACTCATTATCCAACCTAAGAAGAATGAGATTAGAGCGGATTTCTGTTCCTCCCTTTGTCATGTTGAAGAATCTTAAAAAATTATCCCTTTACTTTTGTAATACAAGACAGGCTTTTGAAAACGGAAACATGCTAATTTCAGATGCTCTTCCAATTCTAGAAGATTTGAATATTGACTATTGCAATGATATGGTGGAATTGCCTACGGGGCTATGTGAGATCACCTCCTTGAAGATGCTCAGTATTACTAATTGCCATAAGCTTTCAGCATTGCCCCAAGAAATTGGAAATTTGGAGAATTTGAAACTTATAAGGCTAAGTTCCTGTACTGATTTGGAAGGGATACCAAATTCTATTGGAAGGCTTTCAAATTTAAGGCATATGGACATCTCAAACTGCATAAGCCTTCCTAATTTGCCAGAGGACTTTGGTAATCTTTGTAATCTAAGAAATCTGTACATGACAAGTTGTGCAAGGTGTGAATTGCCACCCTCAATCATCAATCTTGAGCATTTAAAAGAGGTGGTATGTGATGAAGAGACGGCTGCTTCTTGGGATGCTTTCAAACCTATGCTTCCCAATCTAAAGATAGATATTCCTCAACTTGATGTCAACTTGAATTGGCTACATGAAATTCACTCCTAA 2004 0.3807 MEEMAQQVKRPFGVPEEPEFTVGLDAPLRELKMELLKEGVSIIVLTGLGGSGKTTLATKLCWDEQVIGSFKENILFVTFSKTPKLKIIVERLFEYCGYQVPQFQSDEDVVNQSGLLLRKIDASPMLLVLDDVWPGSEPLVEKFKVQMPDYKILVTSRVAFPRFGSPYILKPLVHEDAMALFCHHTLLGKNSSNIPEEVVQKIVRHCKGLPLAIKVIGRSLSNQPYELWQKMVEKLSQGHSILDSNTKLVASLKKISDVLEDNSIIKECFIDLALFPENQKIPVAALVDMWVELYGLDNDGIVMANVNKLASMNLANVLETRKNTSDTDSYYYNNHFIILHGILRDITIYQGTQEQVELRKRLMIGITENKTEWWLIREKQQGMMIRILSISTDETCTSYWSHLQPTQAEVLILNLQTSRYTFPKFLKEMSKLKVLIVIRHGFHPSEMKNFESLDSLSNLRRMRLERISVPPFVMLKNLKKLSLYFCNTRQAFENGNMLISDALPILEDLNIDYCNDMVELPTGLCEITSLKMLSITNCHKLSALPQEIGNLENLKLIRLSSCTDLEGIPNSIGRLSNLRHMDISNCISLPNLPEDFGNLCNLRNLYMTSCARCELPPSIINLEHLKEVVCDEETAASWDAFKPMLPNLKIDIPQLDVNLNWLHEIHS* 668
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1515 667 Gene3D - 254 345 IPR036388 -
Gso17g1515 667 Gene3D Ribonuclease Inhibitor 378 646 IPR032675 -
Gso17g1515 667 PRINTS Disease resistance protein signature 42 57 - -
Gso17g1515 667 PRINTS Disease resistance protein signature 119 133 - -
Gso17g1515 667 PRINTS Disease resistance protein signature 206 220 - -
Gso17g1515 667 PRINTS Disease resistance protein signature 549 565 - -
Gso17g1515 667 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 17 653 IPR039203 GO:0050832
Gso17g1515 667 Gene3D - 172 253 IPR042197 -
Gso17g1515 667 SUPERFAMILY RNI-like 414 661 - -
Gso17g1515 667 Pfam NB-ARC domain 27 251 IPR002182 GO:0043531
Gso17g1515 667 Gene3D - 1 160 IPR027417 -
Gso17g1515 667 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 272 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso17g1515 Gso-Chr17 19936915 19942258 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1515 22 626 WRKY Transcription Factor Family AT5G45050 21.536 3.31e-12 68.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1515 - - gmx:100802182 1327.38
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0772 5 17395776 17401222 Gso17g1515 17 19936915 19942258 GST