Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1514 ATGAGCCATTATCTCAAAGGTAAGCAGGAGAAAGGAGGTCCTAGGTTGGTTATCATGGGAGAGACCAAACAACTTGTTACCCTTTTGACACAATTTCAAGAGGCAATGAGGATGGTCAAGGATATAGTGGAAAAAAGCAGATCGAGTAAAACGAGCAAACGATTACTAAGGAAAACCCTCAAGAATATGACTCCTCTACTGCAGGAAATCAATCAATACAATGAACACTTGGACCCACCCAGAGAAGAAATCGACACTCTTATCAAAGAAAAAGACGCCGTAGAAGAGATTGTGTGCTGCTATTCCTGCTCCAGGAGCATTTGGTGGACCAAATTATTCTCTTGGCTTCCACTCTACGGGGATAAATTTTGGAATAACAAGAATTATTCCCTTGCTGCAGATGACAACCAAGTTAAGTATATCAAAAACACACTGTACAAGGTGAAAGAGGTTCTTGAGCGTCTAGACATAGAGAATTTTCAGCTGAAACTCAAAGGTGTTGGATCACCAATCAAGTGTCCTTTTGGTGTTCCTGAAAACCCTGAATTCACTGTTGCGTTGGATCTACCGTTGAGCAAGTTGAAGATGGAGGTTATCAGGGACGGTATGTCCACCCTTTTGTTGACTGGTTTGGGTGGATCTGGTAAAACAACTTTGGCTACAAAGCTCTGTAGGGATGAAGAAGTCAAAGGTAAATTCAAGGAAAATATTTTATTTTTGACCTTCTCACAAACGCCTAAGTTGAAAAGTATTGTAGAAAGACTATTTGATCATTGTGGATACCACGTTCCTGAGTTTATAAGTGATGAAGATGCAATTAAACGGTTGGGAATTTTGCTGCGGAAAATTGAGGGAAGTCCACTTTTGTTGGTACTTGATGATGTTTGGCCTGGATCAGAAGCCCTCATTGAGAAATTTCAATTCCAGATGTCTGATTATAAAATTGTGGTGACTTCAAGGGTTGCATTTCCTAAATTTGGAACCCCATATGTTTTAAAACCACTTGCTCATGAAGATGCAATGACCCTATTCCGACACCATGCTCTCTTGGAAAAAAGCAGTTCAAGTATTCCTGACGAAGAACTTGTCCAAAAGGTTGTGAGATATTGCAAGGGTTTACCCCTCGCCATTAAAGTGATTGGTAGATCACTCAGTCATCGGCCTATTGAGATGTGGCAAAAGATGGTGGAGGAATTTTCACAAGGTCATTCTATACTTGATTCCAATATTGAATTACTTACATGCTTCCAAAAACTCTTGCATGTATTGGAAGATAATCCCAACATCAAGGAGTGCTTCATGGACTTAGGGTTGTTTCCTGAAGACCAAAGAATTCCTCTTCCTGTTCTCATTGATATATGGGCAGTGTTATATGGATATGATGATGACGGCATAGAAGCAACGGACATGATAAATAAATTAGACTCCATGAATCTAGTTAATGTCTTGGTTGCAAGGAAAAATTCAAGTGACTCAGACAATTACTACTACAATAACCACTTTGTCATCCTCCATGATCTTCTAAGAGAGCTTGCAATCTATCAAAACAACCGGGAACCAATTGAAAAGAGAAAAAGACTGATTAATGACATTAATGAAACCGGGGTGAAGCAACAAGGCATGATAGCCCGGTTATTGTCAAAATTTCTCAGATGCAGTGTTAAACAGACACTCCAACAGGTCCCCGCCCGCACATTGTCTATATCAGCTGATGAAACGAACACTTCAGACCAGTCCCACATACAACCATCCCAAGCTGAAGTTCTGGTTTTAAATCTTCAAACTAAGAAGTACTCCTTTCCAGAGTACATGGAGAAAATGAGCGAACTAAAAGTTCTTATCATGACAAATTATGGTTTTCATCCCTGTGAACTTGAAAATTGCAAACTACCCAGCTCTGTATCAAACCTGAAAAGAATCAGACTAGAGCGGATTTCTGTTCCCCACGTAGGGGCATTGAAAAATCTTGAAAAGTTATCCCTCTACATGTGTAGTAACATAAGTCAGATTTTTGAAAATGGTACCATCCCAGTTTCAGATTCATTTCCAAAACTATCAGATTTGAACATTGACTATTGCAAGGATATGGTGGAATTACCTACTGGGATCTGTGATATTACCCCACTAAAGAAGCTCAGTATTACTAATTGCCACAAGCTTAGTTCTCTGCCCCAAAACATTGGAAAGTTGTTGAATTTGGAACTCCTGAACCTAAGTTCCTGCACTGATTTGGAAGAGATACCAGATTCTATTGTAAAACTTTCTAAGCTAAGACTTCTTGACCTCTCAAACTGCATAAGCCTTTCAATTTTACCAGAGGACATTGGTGATCTATGCAATCTCAGGAATCTCAATATGACAAGCTGTGCAAGGTGTGAATTGCCGTACTCAGTAACCAATCTTGAGAATTTAAAAGTGGTGGTATGTGATGAAGAGACAGCTGCTTCATGGGAAGCATTTGAAGCTATGCTTCCAAATCTGAAGTTAGAGGTTCCTCGAGTTGAGGTTAACTTAAACTGGCTTCATTCAATTAGCTCTTAA 2541 0.3955 MSHYLKGKQEKGGPRLVIMGETKQLVTLLTQFQEAMRMVKDIVEKSRSSKTSKRLLRKTLKNMTPLLQEINQYNEHLDPPREEIDTLIKEKDAVEEIVCCYSCSRSIWWTKLFSWLPLYGDKFWNNKNYSLAADDNQVKYIKNTLYKVKEVLERLDIENFQLKLKGVGSPIKCPFGVPENPEFTVALDLPLSKLKMEVIRDGMSTLLLTGLGGSGKTTLATKLCRDEEVKGKFKENILFLTFSQTPKLKSIVERLFDHCGYHVPEFISDEDAIKRLGILLRKIEGSPLLLVLDDVWPGSEALIEKFQFQMSDYKIVVTSRVAFPKFGTPYVLKPLAHEDAMTLFRHHALLEKSSSSIPDEELVQKVVRYCKGLPLAIKVIGRSLSHRPIEMWQKMVEEFSQGHSILDSNIELLTCFQKLLHVLEDNPNIKECFMDLGLFPEDQRIPLPVLIDIWAVLYGYDDDGIEATDMINKLDSMNLVNVLVARKNSSDSDNYYYNNHFVILHDLLRELAIYQNNREPIEKRKRLINDINETGVKQQGMIARLLSKFLRCSVKQTLQQVPARTLSISADETNTSDQSHIQPSQAEVLVLNLQTKKYSFPEYMEKMSELKVLIMTNYGFHPCELENCKLPSSVSNLKRIRLERISVPHVGALKNLEKLSLYMCSNISQIFENGTIPVSDSFPKLSDLNIDYCKDMVELPTGICDITPLKKLSITNCHKLSSLPQNIGKLLNLELLNLSSCTDLEEIPDSIVKLSKLRLLDLSNCISLSILPEDIGDLCNLRNLNMTSCARCELPYSVTNLENLKVVVCDEETAASWEAFEAMLPNLKLEVPRVEVNLNWLHSISS* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1514 846 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 171 436 IPR027417 -
Gso17g1514 846 SUPERFAMILY RNI-like 597 827 - -
Gso17g1514 846 Gene3D - 415 513 IPR036388 -
Gso17g1514 846 Gene3D - 335 413 IPR042197 -
Gso17g1514 846 PRINTS Disease resistance protein signature 205 220 - -
Gso17g1514 846 PRINTS Disease resistance protein signature 282 296 - -
Gso17g1514 846 PRINTS Disease resistance protein signature 370 384 - -
Gso17g1514 846 PRINTS Disease resistance protein signature 752 768 - -
Gso17g1514 846 Pfam NB-ARC domain 204 401 IPR002182 GO:0043531
Gso17g1514 846 Gene3D - 169 323 IPR027417 -
Gso17g1514 846 Gene3D Ribonuclease Inhibitor 548 824 IPR032675 -
Gso17g1514 846 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 30 832 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1514 Gso-Chr17 19877518 19881921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1514 210 798 WRKY Transcription Factor Family AT5G45050 21.818 3.82e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1514 - - gmx:112997603 1655.57