Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1505 ATGAGGTGGTTGCCCACGCTTTCGTTCTCGCCTTCTTCGAATCCTTCTTCTTCGTCTTCGTCTTCGTCGTCGTTATCTTTGTCTTCTTCTTCTGCCGCCCCCGACCACCGCCGGAAGGCATGGATCTTCGGAAATTCGGCGAAGAAGCGCACCTGCCACGTCGGCGATCACGACGAAGATGCACTGGTTTCTTCCCCCGGCACGCCTCAGCCGTTGCCCCTGCCGGAGCTCGCTGTCTCCGCCGCCGTGCTCCGTCAGCGAGACGGCGAGTGCCGTCTTCCTTCGCCCAAGGATGCTGCACCCTCCACCACCACCACCGGCTTTCGGATGCGGAGTGTTTTTGCTAGCCAAGAGACAAGAAGGAATATGGAGCAGGCAGAAACTAGGTCATCGAGAATGGTGCAGCAAGATGCAAGTGGTTGCCGTGAGAGTGCTCGAGATAATAGTAATAATAACTTGGTGAATGTCCCTCATAGGAGGAGTATTTCGGGTAGTCCTTCAATGAGTCCTCAGAAAACAAGGAATGGTGATTTTGTGCCATATTATTATGCGTGTCCAAAAGGAAATCAGTTCTGGTCCACACCAGAAATGCCTACCTGTGATGCAGGGTTGCTACCTCCTGCCTTCTTTGATTTATCCGCGTTAAGCACAGAAACTTCTCTTTCTCCCAATTCCCATCAAAGTCCACAAAGAAAAAGTCCCCAGAAACACACCAGAACTTTTAGTGGACCTCCATCCCCCATACATCCCATGTTATCACTCGAGATCCCAACAGTGCGCCACGAAAATAATGCTCCTCCTGTCGCTGTTCACCCCTTGCCCCTGCCTCCCAGGGCTGGCTTGACCTCGCCGCCTGCTGCCGCTACCTTTTCCCACGCCATGGTTAAGTCAGAATCGCTGCCAATGAAAAGCCAATGGAAGAAAGGGAAACTTATTGGGCGTGGGACGTTTGGAAGCGTTTATGTCGCAACCAATAGGGAAACCGGAGCATTATGTGCAATGAAGGAAGTAGAATTATTTCCTGATGATCCAAAATCTGCTGAGTGTATAAAGCAGTTAGAGCAGGAAATTAAAGTTCTTAGCAATCTAAAACATTCAAACATCGTACAGTATTATGGCAGTGAAATAGTTGAGGACCGGTTTTATATTTATCTGGAATATGTTCATCCTGGTTCAATTAATAAATATGTCCGTGATCATTGTGGTGCCATAACAGAATCTGTCATTCGGAATTTCACTCGCCATATTCTCTCAGGGGACATCAAAGGGGCTAACTTGCTTGTTGACTCTGCTGGAGTTGTTAAGCTAGCTGATTTTGGGATGGCTAAGCATCTAACTGGGTTTGAAGCTAATCTTTCTTTGAGGGGAAGTCCATACTGGATGGCTCCAGAGCTTTTGCAGGCTGTGATACAAAAGGATAACAGCCCTGATCTTGCTTTTGCTATTGATATTTGGAGTTTGGGTTGTACCATCATTGAAATGTTCACTGGGAAGCCTCCTTGGAGTGAATATGAAGGAGCTGCAGCTCTGTTTAAGGTTATGAAGGAGACCCCTCCTATACCTGAAACACTTTCATCTGAGGGTAAAGATTTCTTGAGGTGCTGCTTTAAAAGAAATCCAGCAGAGCGGCCAACAGCTGCAGTTTTACTAGAACATCGATTTTTGAAAAACTCGCAACAGCCAGATGCTATATCTCCCACCCAGCTTTATAATGGAACAAGCTTCATGGACAAACCACATACTCCCAGTGGGCAATCTGAAAATAGATATGGTCAGTTTTCAACTCCCTGTGCAAAGATTGCAAAGGGTAAAGCAGCCGAAAGGCGAGGATTTCTCATTTCTTCGTTAGATATTCTCCCTGCATACTTTGACCAATAA 1878 0.4712 MRWLPTLSFSPSSNPSSSSSSSSSLSLSSSSAAPDHRRKAWIFGNSAKKRTCHVGDHDEDALVSSPGTPQPLPLPELAVSAAVLRQRDGECRLPSPKDAAPSTTTTGFRMRSVFASQETRRNMEQAETRSSRMVQQDASGCRESARDNSNNNLVNVPHRRSISGSPSMSPQKTRNGDFVPYYYACPKGNQFWSTPEMPTCDAGLLPPAFFDLSALSTETSLSPNSHQSPQRKSPQKHTRTFSGPPSPIHPMLSLEIPTVRHENNAPPVAVHPLPLPPRAGLTSPPAAATFSHAMVKSESLPMKSQWKKGKLIGRGTFGSVYVATNRETGALCAMKEVELFPDDPKSAECIKQLEQEIKVLSNLKHSNIVQYYGSEIVEDRFYIYLEYVHPGSINKYVRDHCGAITESVIRNFTRHILSGDIKGANLLVDSAGVVKLADFGMAKHLTGFEANLSLRGSPYWMAPELLQAVIQKDNSPDLAFAIDIWSLGCTIIEMFTGKPPWSEYEGAAALFKVMKETPPIPETLSSEGKDFLRCCFKRNPAERPTAAVLLEHRFLKNSQQPDAISPTQLYNGTSFMDKPHTPSGQSENRYGQFSTPCAKIAKGKAAERRGFLISSLDILPAYFDQ* 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1505 625 MobiDBLite consensus disorder prediction 218 242 - -
Gso17g1505 625 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 602 - -
Gso17g1505 625 Pfam Protein kinase domain 307 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1505 625 MobiDBLite consensus disorder prediction 118 173 - -
Gso17g1505 625 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 602 - -
Gso17g1505 625 Gene3D Transferase(Phosphotransferase) domain 1 395 597 - -
Gso17g1505 625 MobiDBLite consensus disorder prediction 128 173 - -
Gso17g1505 625 MobiDBLite consensus disorder prediction 1 33 - -
Gso17g1505 625 SUPERFAMILY Protein kinase-like (PK-like) 295 586 IPR011009 -
Gso17g1505 625 ProSitePatterns Protein kinases ATP-binding region signature. 312 335 IPR017441 GO:0005524
Gso17g1505 625 Gene3D Phosphorylase Kinase; domain 1 299 394 - -
Gso17g1505 625 MobiDBLite consensus disorder prediction 218 248 - -
Gso17g1505 625 SMART serkin_6 306 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1505 625 ProSiteProfiles Protein kinase domain profile. 306 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1505 625 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1505 Gso-Chr17 19349253 19354790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1505 129 577 MAP Kinase Kinase Kinase AT5G66850 61.807 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Gso17g1505 Pkinase 8.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1505 - - gmx:100790701 1204.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1580 1 52462959 52466851 Gso17g1505 17 19349253 19354790 PCT
Gso11g0496 11 4427329 4431410 Gso17g1505 17 19349253 19354790 PCT
Gso17g1505 17 19349253 19354790 Gso1g1580 1 52462959 52466851 PCT
Gso17g1505 17 19349253 19354790 Gso11g0496 11 4427329 4431410 PCT