Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1504 ATGGAGTGCACTTCCAATAATAAGCATTCTTTTGTTCTCTTGATTTTGCTCGTACTCCTTAGTCCTCTAGTACTTTGCCAACTTAGATATGACTACTATTTTGCAACATGTCCAACCCTCACTTTCATTGTTCGAAACTCACTTGTGCTAGCTATGGCAGATGAACAAAGGATTGCAGCTTCTATCTTACGCCTTCATTTCCATGATTGTTTTGCCAATGGATGTGATGCATCTGTGCTACTAGATGATACCAGCAGTTTTAAAGGGGAGAAAAGTGCATTGCCTAATCTAAATTCACTCAAAGGATTTGAGCTTATTGACACAATCAAGTCTCAAATAGAGTGGATATGCCCATCCACCGTGTCATGTGCTGATATACTAGCTCTAGCAGCAAGAGAAGCTGTTAATCTTAGTATAGGAACATATTACTGGCGACCAGCACTTCTTGGTCGTAGAGACGGCACAACAGCTAGTGAGAGCGAGGCTAGTTGGTTACCTTCACCCTCTGACACCTTACAAAACATTACCAACAAGTTCCTTTCAAAGGGTCTTGATATTAAGGATTTAGTAGTGCTCTCAGGAGCCCACACAATAGGCTATGCTCGGTGCTTTACATTGAAGCAAAGGTTTTTCAACTATAAGGACACTGGCAAACCGGATCCATCACTGGATGCTTCACTCTTACAACATTTACAGAAACTATGTCCAGATAACAGTTCTGACACCAATTTGGCTCCCTTGGATCCTGTCACCACATACACATTTGATAACATGTATTACAAAAACCTTGTTAAGAACTTAGGGTTACTACCAACTGATGAGGCTCTTATGAGTGATAGCACAACTGCTTCGTTGGTGAACAAGTATAGCCAGTGGCCAAGTGGTATGGTTTACTTTTACAAGGACTTTGATGTGTCTCTAGAGAAAATGGGCCTTATAGGTGTACTTACAGGACCACAAGGGGACATAAGGAAAAACTGCAGGGTGATCAACTAG 996 0.4147 MECTSNNKHSFVLLILLVLLSPLVLCQLRYDYYFATCPTLTFIVRNSLVLAMADEQRIAASILRLHFHDCFANGCDASVLLDDTSSFKGEKSALPNLNSLKGFELIDTIKSQIEWICPSTVSCADILALAAREAVNLSIGTYYWRPALLGRRDGTTASESEASWLPSPSDTLQNITNKFLSKGLDIKDLVVLSGAHTIGYARCFTLKQRFFNYKDTGKPDPSLDASLLQHLQKLCPDNSSDTNLAPLDPVTTYTFDNMYYKNLVKNLGLLPTDEALMSDSTTASLVNKYSQWPSGMVYFYKDFDVSLEKMGLIGVLTGPQGDIRKNCRVIN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1504 331 SUPERFAMILY Heme-dependent peroxidases 27 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 ProSiteProfiles Plant heme peroxidase family profile. 27 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PANTHER PEROXIDASE 72-RELATED 13 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Gso17g1504 331 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Gso17g1504 331 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PANTHER PEROXIDASE 13 330 - -
Gso17g1504 331 Gene3D Peroxidase, domain 2 166 310 - -
Gso17g1504 331 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 CDD secretory_peroxidase 27 330 IPR033905 GO:0004601|GO:0042744
Gso17g1504 331 Pfam Peroxidase 45 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso17g1504 331 Gene3D - 31 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1504 Gso-Chr17 19329321 19332792 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1504 27 327 Peroxidase AT1G49570 56.393 1.64e-114 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1504 K00430 - gmx:100789642 656.751