Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1453 ATGGCAGAGGATATTGACTTGAATGGAGATCCTAACAACAAGAAAGACTCAAACAACAGCGAGGCCAAAGATGAAACTGCAAAAACAGAATGGAATCTCCATGGCCTTAATGTCTTTGGAAATATGATGAATTCATTTGGAGGAACCAAAATCTCCAACGAAGTTGTTCATGAAGCTTCTAAGGTGTCTCTGAAATTTGTATACTTGGCCGTGGATACCTTTTTTGTGTCACTTTTGCCCAATTATAGTTGGGCTACATGGTTTGGTGCAAAAATGGTAATAGAGGAAGGATACACAGGAGGAGAGGTTGTGACAATAATTATGGCTATATTGAATGGCTCCTTGGAAGTTGTGTCTCTTGGGCAGGCATCTCCAAGCTTCACTGCTTTTGCTGCTGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATTAAAAGGAAGGCAGAGATTGATGCTTATGACATTACTAGTCGACAGCTTGATGACATTTGTGGAGATATAGAGGTTAGGGTGGTTTGCTTTAGTTATCCTACTAGACTTGATGAACTGATATTCAATGGATTTTCTCTTTCAATACCAAGCGGCACTACTACAACTTTGGTAGGAGAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGGTAGACAGATTTTATGATGGTGCAATTGTTGAAGAGAATATTGCCTATGGAAAGGATGGTGCATTTGTTGAAGAAATCAAAGATGGGGCCGAACTAGCTAATCTTTCCAAAATTATAGATAAACTTCCTCAGCTAGTCCAAGTGATAGACGTGTCATCCTCCGAAGAGGATCCTGAAGAGGACCCAGAGGAGTTACCTCCTAAGCCTGTTGTGGATGCTCTTGACTTTCCAGAGGATGATGAGGACCCACTCTCTTATGTGGATTCTCTAGAGGATATCATGTCAGCATCTGAGGTAGACTCTACAGAGGAGAGCGGCCCTGGAGGGACAACGAATAGTGAAGACTCTTCATCATAG 999 0.4184 MAEDIDLNGDPNNKKDSNNSEAKDETAKTEWNLHGLNVFGNMMNSFGGTKISNEVVHEASKVSLKFVYLAVDTFFVSLLPNYSWATWFGAKMVIEEGYTGGEVVTIIMAILNGSLEVVSLGQASPSFTAFAAGQAAAFKMFETIKRKAEIDAYDITSRQLDDICGDIEVRVVCFSYPTRLDELIFNGFSLSIPSGTTTTLVGESGSGKSTVVSLVDRFYDGAIVEENIAYGKDGAFVEEIKDGAELANLSKIIDKLPQLVQVIDVSSSEEDPEEDPEELPPKPVVDALDFPEDDEDPLSYVDSLEDIMSASEVDSTEESGPGGTTNSEDSSS* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1453 332 Gene3D ABC transporter type 1, transmembrane domain 69 156 IPR036640 GO:0005524|GO:0016021
Gso17g1453 332 Gene3D - 157 220 IPR027417 -
Gso17g1453 332 PANTHER - 74 220 - -
Gso17g1453 332 PANTHER - 38 73 - -
Gso17g1453 332 PANTHER - 225 258 - -
Gso17g1453 332 MobiDBLite consensus disorder prediction 1 27 - -
Gso17g1453 332 MobiDBLite consensus disorder prediction 8 27 - -
Gso17g1453 332 Pfam ABC transporter 186 292 IPR003439 GO:0005524
Gso17g1453 332 MobiDBLite consensus disorder prediction 309 332 - -
Gso17g1453 332 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 38 73 - -
Gso17g1453 332 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 225 258 - -
Gso17g1453 332 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 74 220 - -
Gso17g1453 332 MobiDBLite consensus disorder prediction 265 332 - -
Gso17g1453 332 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 258 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1453 Gso-Chr17 16646611 16650378 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1453 77 258 Calmodulin-binding Proteins AT2G36910 31.222 3.90e-20 89.7