Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1444 ATGGCTAATGAAGAGGAACAGAAAAACCACCTCTTCGGCATCAAAGATCTCGGTCACAAGACTCTCCTTCAGAGTGATGCACTCTATCAGTATATACTTGAAACCAGTGTCTATCCAAGAGAGCACGAGTGCTTGAAAGAGATACGCAAGATGACTGCAAAACACCCACTGAACATCATGGCAACACCAGCAGACGAAGGACAACTTCTGAGCATGCTTGTTAAGCTCACGAATTCAAAGAACGCCTTGGAAATTGGTGTATTCACTGGTTACTCTCTGCTCTCCACTGCCCTGGCTCTTCCCCCTGATGGAAAGGAAAATAAAAAGGGGTCGTTGGATTTCGTTTTCGTGGATGCTGATAAGGACAATTACTTGAACTACCACAAGAGGGTACTAGAGCTTGTGAAGATTGGAGGACTGATCGGATACGATAACACCCTATGGGCTGGATCTGTGGCTGCACCACCCGATGCACCATTGATGGATTACATTAAGCCTCTTCGCGGCCATGTGATGGAGCTCAACAAGTATCTGGCTCAAGATTCGAGGATCGAGATTTGCCAGCTCCCCGTGGGTGATGGGATTACCCTGTGCCGCCGCATCATCTGA 609 0.4778 MANEEEQKNHLFGIKDLGHKTLLQSDALYQYILETSVYPREHECLKEIRKMTAKHPLNIMATPADEGQLLSMLVKLTNSKNALEIGVFTGYSLLSTALALPPDGKENKKGSLDFVFVDADKDNYLNYHKRVLELVKIGGLIGYDNTLWAGSVAAPPDAPLMDYIKPLRGHVMELNKYLAQDSRIEICQLPVGDGITLCRRII* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1444 202 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 201 IPR002935 GO:0008171
Gso17g1444 202 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 4 105 - -
Gso17g1444 202 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 106 202 - -
Gso17g1444 202 PANTHER O-METHYLTRANSFERASE-RELATED 4 105 - -
Gso17g1444 202 PANTHER O-METHYLTRANSFERASE-RELATED 106 202 - -
Gso17g1444 202 Gene3D Vaccinia Virus protein VP39 11 105 IPR029063 -
Gso17g1444 202 Pfam O-methyltransferase 34 105 IPR002935 GO:0008171
Gso17g1444 202 Pfam O-methyltransferase 106 201 IPR002935 GO:0008171
Gso17g1444 202 Gene3D Vaccinia Virus protein VP39 106 201 IPR029063 -
Gso17g1444 202 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 200 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1444 Gso-Chr17 16152380 16154713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1444 4 201 Monolignol Biosynthesis Gene Families AT4G34050 56.198 2.69e-94 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1444 K00588 - gmx:100305498 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1613 1 52797918 52799859 Gso17g1444 17 16152380 16154713 PCT
Gso11g0469 11 4139145 4141937 Gso17g1444 17 16152380 16154713 PCT
Gso17g1444 17 16152380 16154713 Gso1g1613 1 52797918 52799859 PCT
Gso17g1444 17 16152380 16154713 Gso11g0469 11 4139145 4141937 PCT