Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1439 ATGGTTAAGCCGAAGCAACAGAAGAAGCTATACCAGAAGAAGCAACCACACCCACAAATTAAGAAGCAGGGAAAACAAGTAGGTACTTCTCAATTTCGGACTCAGTTGGATGGTCTGGGCTTACGCATTGTTGAAGTGACTGCAGATGGTAATTGTTTCTTCAGAGCTGTTGCTGATCAGTTGGAAGGCAATGAGGAGGAACATGGAAAGTACCGCAGCATGGTGGTGAAACACATATTGGATAACCGGGAGATGTTTGAACCCTTTATCGAAGATGAAGTCCCATTTGATGAATATTGCCAGTCTATGGAAAATGATGGTACGTGGGCTGGACATATGGAATTGCAGGCAGCTTCTCTTGTAACGCGTAGTAATATATGCATTCATCGGAACATGTCCCCTCGTTGGTACATAAGAAATTTTGATAATCGTGGAGTTCGTATGATCCATCTGTCTTATCATGATGGGGAGCATTATAACAGTGTGCGGTTAAAGGATGATCCTTGTGATGGAGCTGCAAGGCCAATTGTAATTGAGGCTGATGCTGATCTTTCAGTACCATCACATCAAACAAAAGTTGTGGGCAACAAATTCCATGGGCGAGCTGGTTGGGAAGCCTTTCAACCAGGGTCCATAAAGTTGGTTATGGCAGGAACTGGATGTGAAAATGCCGAAAAAGTGGAACAGATTCTAGAGCAAGTAAATGGAGATGTTGACGCTGCAATAGAGTTTCTAATAGCAGAACAAGGAACAGAAGAATGCTCTGCAAACTCTGATTCCCTTCCAAATCAGGCTAATACTTGCGCATGTGCAGGTCATGATGAAAATGAGAATCATAAGCAGCACAAAGAAGACATGGTAGAGGAAAGCACTAATGATGAATCAAATAATAGCTCCAAGAAGACCAATACTTATACCACATTGCAACCAAATGACAAGATTCCTAGAAACAAGGTCTGCCCGTGTGGTTCCCAAAAGAAATACAAAGCTTGTTGTGGATCTGCTTTGGGGAAACAATCGGCTAAGTTTGTAGTTCACCAAGCAGCTGACTCAAAAAAGGGCAAAAAAGAAAGGAAGCAAGGAAAAAAGGGGATTTCTGCAAAAGCTGAAGTACCTAGTGAATATGACTTGGAACTTTTCATTGCTTTGCAAAAATGA 1158 0.4206 MVKPKQQKKLYQKKQPHPQIKKQGKQVGTSQFRTQLDGLGLRIVEVTADGNCFFRAVADQLEGNEEEHGKYRSMVVKHILDNREMFEPFIEDEVPFDEYCQSMENDGTWAGHMELQAASLVTRSNICIHRNMSPRWYIRNFDNRGVRMIHLSYHDGEHYNSVRLKDDPCDGAARPIVIEADADLSVPSHQTKVVGNKFHGRAGWEAFQPGSIKLVMAGTGCENAEKVEQILEQVNGDVDAAIEFLIAEQGTEECSANSDSLPNQANTCACAGHDENENHKQHKEDMVEESTNDESNNSSKKTNTYTTLQPNDKIPRNKVCPCGSQKKYKACCGSALGKQSAKFVVHQAADSKKGKKERKQGKKGISAKAEVPSEYDLELFIALQK* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1439 385 MobiDBLite consensus disorder prediction 277 310 - -
Gso17g1439 385 MobiDBLite consensus disorder prediction 1 20 - -
Gso17g1439 385 MobiDBLite consensus disorder prediction 292 310 - -
Gso17g1439 385 Gene3D - 27 165 - -
Gso17g1439 385 ProSiteProfiles OTU domain profile. 41 165 IPR003323 -
Gso17g1439 385 SUPERFAMILY Sec-C motif 313 334 - -
Gso17g1439 385 PANTHER OTU DOMAIN CONTAINING PROTEIN 8 312 - -
Gso17g1439 385 PANTHER OTU DOMAIN-CONTAINING PROTEIN 3 8 312 - -
Gso17g1439 385 SUPERFAMILY Cysteine proteinases 23 163 IPR038765 -
Gso17g1439 385 Pfam SEC-C motif 316 333 IPR004027 -
Gso17g1439 385 Gene3D - 240 336 - -
Gso17g1439 385 MobiDBLite consensus disorder prediction 347 368 - -
Gso17g1439 385 CDD CUE 225 245 - -
Gso17g1439 385 Pfam OTU-like cysteine protease 48 136 IPR003323 -
Gso17g1439 385 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1439 Gso-Chr17 16011490 16030410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1439 36 196 C2H2 Transcription Factor Family AT1G50670 23.494 5.53e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1439 K13717 - gmx:100788938 724.161