Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1431 ATGGAAGCATCAGAGAAATGCTCTGTGAAAGTCGCTCTTCACATTCGTCCTCTCATTGCCGATGAACGACAACAAGGTTGCATTGAATGTGTTTCCGTTACGCCTTCGAAGCCTCAGGTTCAAATTGGGTCGCATGCCTTTACATTTGATTACGTTTATGGAAATGGTGGATCTCCTTCAGTTGAGATGTTTGAGGAATGCGTTGCTCCATTGGTTGATGGCTTATTCCAAGGATACAATGCTACAGTACTTGCCTATGGTCAGACAGGATCTGGGAAAACATATACCATGGGAACTGGCTATAATGACAATTGTCGGAGTGGATTAATTCCTCAGGTTATGAATGCGTTGTTCAAGAAGATTGAAACACTAAAGCATCAAACAGAATTTCAGTTGCGAGTCTCCTTCATTGAGATTTTGAAGGAAGAGGTGAGGGACTTGTTCGATAGGGTATCTATGGGCAAACCAGAAACCTCTAACTCTAATGGCCATTCTGGAAAAATAACTGTTCCTGGGAAGTCACCAATACAAATTCGTGAAACATCAAATGGAGTAATAACACTGGCAGGAATAACTGAAGTTGCTGTAAGTACATTACATGAGATGTCTTCTTACTTGGAGCAGGGTTCTTTAAGCAGGGCAACGGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATTTTCACAATTACATTAGAACAGATGCACAAACTCCATTCTAGTTCTCCCACCAATGACTCTTCAGATGAGGATATGGGTGAAGAATACCTTTCAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGATGGTGTTCGTTTGAAAGAAGGTATACACATCAATAAAGGTCTTCTTGCTCTTGGTAATGTCATAAGTGCACTAGGGGATGAGAAAAAGCGAAAGGAGGGTGTACATGTTCCTTATCGGGATAGCAAACTCACTCGACTCTTACAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATTAGTCCTGCTGATATCAATGCTGAGGAAACTCTCAATACTCTCAAGTATGCAAACCGTGCTCGTAATATTCAAAATAAGCCTGTAGTTAATCGAGATTTAATCTCCAATGAGATGCAGCAATTGCGCCAGCAGTTGAAGTATTTGCAGGCTGAACTTTGTTCTCGGGTTCTCAAGGAAAGGATTGCTTGGCTTGAGTCTACTAATGAGGACCTCTACAGAGAACTTCATAAATATCGCAGTAGATGTGCTTTTGTAGAGAGATGTGAAATTGATGAACCTAATGGACACATTATTCTCATGAAAACCGATGGGCTTGAGAGGCACTTTCAGAGCTTAGATTCATCTGACCATCCCATGGTTGGAAGTATATCAGGTGAGGATTCTAAGGAAACTGATGAAGCAGCTAAAGAGTTGGAGCATGTACTATTGCAAAATACCATGGATAAAGAAATGAATGAATTGAATAAGCGCTTGGAGCAGAAAGAGTCTGAGATGAAGGTCATTGCAGTTGATACTGAAACACTCAAACAACACTTTGGGAAGAAAATTTTGGAACTTGAGGAGGAGAAAAGAAAAGTGCAGGAAGAGAGGGACCGTTTATTGCACGAGGTAGAGAATCTTGCTTCTAATTCAGATGGGCTAGCACACAAAACTCAAGATGTTCGTGGCCAAAAATTGAAGGCATTGGAAGCACAGATTTTAGACCTCAGGAAGAAACAAGAAAGCCATGTGCAGCTATTAAAGCAAAAAGAGAAGAGTGAAGACGCTGCAAAAAGACTGCAGACTGAGATACAATATATCAAGGCTCAGAAGGTTCAGTTGCAGCATAAAATGAAGCAAGAGGCAGAACAATTTCGACAATGGAAGGCTTCTCGTGAGAAGGAGCTACTCCAGTTGAAAAAGGAGGGAAGAAAAAATGAGTACGAAAGACATAAGCTTGAGGCTCTAAACCAACGTCAGAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATGGCTACGAAAAGGCTAAAAGAATTGTTGGAGGCCCGCAAATCTTCTCCCCGTGATAACTCTGTTTATTCAAATGGACATCTACAGCCTGGGCTGGTCAATGAAAAATCCCTCCAAAGGTGGCTTGATCAGGAGCTGGAGGTCATGGTACATGTGCATGAAGTTCGTGCTGAATATGACAAACAAAATCAAGTCCAAGCTGCACTGGAAGAGGAGTTGGCTTTACTAAAACAGGATCGGTTTTCAGATGGGCAGACTATTCCCAAAGGAAAGAGCAAATATTTGAGGCTGTTATCCATGTCACCAGATGCAAAAGTTGAGAGAATAGCTTCTCTTGAGAACATGTTGTGCATGTCCTCAGTTGCTTTGAAAGCCATGGCTTCACAACTCACTGAGGCAGAAGAAAGGGAACGAACATTAAATAACCGAGGTCGTTGGAACCAGCTACGCTCAATGGGAGATGCAAAGAATGTGCTTCAATATTTGTTCAATGCTACTGCAGAAGCAAGGTGCAAATTGTGGGAAAAGAATATGGAACTTCAGGATTTGAAAGAACAACTAAATGAGCTTGTAGCACTGCTACAACAAAGTGAAGCACAGAGAAAAGAACTTGTAAAGGAGCAAAAAATAAAAGAACAAGCTGTTGCCATCACATTGGATACACCAGCATTGGAAAACTCACGGTCCTTAAAACACCTTGCGGATGAAATGAGTGGTCCGTTATCTCCAATGTCGCTTCCTGCACCAAAGCAACTCAAATTCACTCCTGGAGTTGTTAATTGGTCAGGCAGGGAGTCAGCTACATTTTTAGATGAAGCACGAAAGATGATACCCATTGGAGAGTTGTCAACGAAGAGGCTAGCAGCTATAGGACAAGCCGGAAAACTTTGGAAGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAATGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACACAGTGATGAGACAATTATGAGGTTGACAAGAGGACAGTTGATTGCAGTATGCATGCAGGTACGATGTAAATTGGACAGTTTCCTGGGATTTGTCAGGGTCGTTTTGCTGGAGAAAGTTTGGATGTTGGAGAAAGTTGTCATAATTCTGTGTAGCTTGTAA 3165 0.4193 MEASEKCSVKVALHIRPLIADERQQGCIECVSVTPSKPQVQIGSHAFTFDYVYGNGGSPSVEMFEECVAPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGYNDNCRSGLIPQVMNALFKKIETLKHQTEFQLRVSFIEILKEEVRDLFDRVSMGKPETSNSNGHSGKITVPGKSPIQIRETSNGVITLAGITEVAVSTLHEMSSYLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMHKLHSSSPTNDSSDEDMGEEYLSAKLHLVDLAGSERAKRTGSDGVRLKEGIHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADINAEETLNTLKYANRARNIQNKPVVNRDLISNEMQQLRQQLKYLQAELCSRVLKERIAWLESTNEDLYRELHKYRSRCAFVERCEIDEPNGHIILMKTDGLERHFQSLDSSDHPMVGSISGEDSKETDEAAKELEHVLLQNTMDKEMNELNKRLEQKESEMKVIAVDTETLKQHFGKKILELEEEKRKVQEERDRLLHEVENLASNSDGLAHKTQDVRGQKLKALEAQILDLRKKQESHVQLLKQKEKSEDAAKRLQTEIQYIKAQKVQLQHKMKQEAEQFRQWKASREKELLQLKKEGRKNEYERHKLEALNQRQKMVLQRKTEEATMATKRLKELLEARKSSPRDNSVYSNGHLQPGLVNEKSLQRWLDQELEVMVHVHEVRAEYDKQNQVQAALEEELALLKQDRFSDGQTIPKGKSKYLRLLSMSPDAKVERIASLENMLCMSSVALKAMASQLTEAEERERTLNNRGRWNQLRSMGDAKNVLQYLFNATAEARCKLWEKNMELQDLKEQLNELVALLQQSEAQRKELVKEQKIKEQAVAITLDTPALENSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNWSGRESATFLDEARKMIPIGELSTKRLAAIGQAGKLWKWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRLTRGQLIAVCMQVRCKLDSFLGFVRVVLLEKVWMLEKVVIILCSL* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1431 1054 Coils Coil 728 755 - -
Gso17g1431 1054 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1011 - -
Gso17g1431 1054 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 397 IPR027417 -
Gso17g1431 1054 Coils Coil 375 395 - -
Gso17g1431 1054 Gene3D Kinesin motor domain 1 395 IPR036961 -
Gso17g1431 1054 CDD KISc_KIF4 7 368 - -
Gso17g1431 1054 Coils Coil 570 621 - -
Gso17g1431 1054 Coils Coil 488 515 - -
Gso17g1431 1054 Pfam Kinesin motor domain 16 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1431 1054 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1431 1054 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1431 1054 PRINTS Kinesin heavy chain signature 263 281 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1431 1054 PRINTS Kinesin heavy chain signature 317 338 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1431 1054 Coils Coil 849 890 - -
Gso17g1431 1054 Coils Coil 668 688 - -
Gso17g1431 1054 SMART kinesin_4 6 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso17g1431 1054 Coils Coil 799 819 - -
Gso17g1431 1054 PANTHER KINESIN-LIKE PROTEIN KIN-4B 1 1011 - -
Gso17g1431 1054 Coils Coil 520 554 - -
Gso17g1431 1054 MobiDBLite consensus disorder prediction 155 174 - -
Gso17g1431 1054 ProSitePatterns Kinesin motor domain signature. 262 273 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gso17g1431 1054 ProSiteProfiles Kinesin motor domain profile. 8 367 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1431 Gso-Chr17 15690834 15703602 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1431 6 391 Calmodulin-binding Proteins AT5G65930 34.615 2.43e-54 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1431 - - gsj:114393858 2035.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0797 5 20071706 20090575 Gso17g1431 17 15690834 15703602 GST