Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1426 ATGGCCGTGGACCTCATGACGACCGGTTACACCCGAAACGACAACATCAGTAGTTTCACAACCAAAGCCGAGGAAAATGCCGTCCAAGAAGCCGCTTCTGGTCTAGAGAGCGTCGAGAAGCTCATCAGACTCCTCTCCCAAACCCAAGCCCAAGCCCAAGCCCACCATCAATTCAACAACAACAATAGCTCTAGTAATGAAATCGCCATCGCCATGGACTGCAAAGCCGTCGCTGACGTGGCAGTCTCCAAGTTCCAGAAGGTCATTTCCCTCCTCGGCCGAACCCGTACCGGCCACGCCAGGTTCCGACGCGCCCCTCTCCCCAACCAACACCAACACACCCAACCTCCCTCCGAACCGCCCGTTCTCCACGCTACCCCGCTGCACCAGATCCCACCTCCCTCCCTTCACCAAATCCCCAAAACCGAGAAACACCTCAACGATTCATCGTCTAAGACGCTTCATTTCTCATACCCCTCCGCCGTTACTTCCTTCGTCTCCTCCCTCACCGGCGACGCCGCCGACAACAAACAACCATCCCCGGCGGCCACGACCACGACCTCCCACTTTCAGATCACGAGCCTCTCTCACGTGTCGTCCGCGGGGAAGCCTCCGCTTTCGTCTTCCTCTTTCAAGAGAAAGTGCAGCTCTGAGAATTTAGGTTCTGGAAAGTGCGGTAGCTCCTCTAGCCGCTGTCATTGTTCCAAAAAGAGGAAAATGAGGTTGAAGAGGGTAGTGAGGGTACCAGCTATAAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGGAAATATGGACAGAAACCAATTAAAGGATCGCCTCATCCAAGGGGTTACTACAAGTGCAGTAGTGTGAGAGGGTGTCCAGCGCGAAAACATGTGGAAAGAGCTTTGGATGATCCAGCTATGCTGGTGGTAACATACGAGGGAGAGCACAATCACACTGTCTCTGCTGCCGATGCTACTAATCTCATTCTAGAATCGTCTTGA 999 0.5325 MAVDLMTTGYTRNDNISSFTTKAEENAVQEAASGLESVEKLIRLLSQTQAQAQAHHQFNNNNSSSNEIAIAMDCKAVADVAVSKFQKVISLLGRTRTGHARFRRAPLPNQHQHTQPPSEPPVLHATPLHQIPPPSLHQIPKTEKHLNDSSSKTLHFSYPSAVTSFVSSLTGDAADNKQPSPAATTTTSHFQITSLSHVSSAGKPPLSSSSFKRKCSSENLGSGKCGSSSSRCHCSKKRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGEHNHTVSAADATNLILESS* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1426 332 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 19 332 IPR044810 GO:0003700
Gso17g1426 332 SMART WRKY_cls 259 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1426 332 MobiDBLite consensus disorder prediction 195 232 - -
Gso17g1426 332 Pfam Plant zinc cluster domain 212 257 IPR018872 -
Gso17g1426 332 Pfam WRKY DNA -binding domain 261 317 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1426 332 SUPERFAMILY WRKY DNA-binding domain 256 319 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g1426 332 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 19 332 - -
Gso17g1426 332 MobiDBLite consensus disorder prediction 106 152 - -
Gso17g1426 332 Gene3D WRKY domain 245 320 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso17g1426 332 ProSiteProfiles WRKY domain profile. 254 320 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso17g1426 332 MobiDBLite consensus disorder prediction 195 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1426 Gso-Chr17 15607512 15609619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1426 24 317 WRKY Transcription Factor Family AT2G24570 43.161 4.29e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso17g1426 WRKY 4.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1426 - - gmx:100788748 603.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0840 5 27063748 27065918 Gso17g1426 17 15607512 15609619 GST
Gso17g1426 17 15607512 15609619 Gso1g1625 1 52933084 52935024 PCT
Gso17g1426 17 15607512 15609619 Gso11g0456 11 4031654 4033329 PCT