Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1411 ATGACATTCAAGCGCAGGAATGGAGGTCGCAACAAACACGGCCGTGGCCACGTCAAATTCATCCGATGCTCCAACTGTGGCAAATGCTGCCCCAAGGACAAGGCCATCAAGAGGTTTCTTGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGCAGGAAGCCTGTGTCTATGAACAGTACACGCTTCCGAAACTCTATGTGAAGATGCAGTACTGTGTTTCCTGTGCTATCCACTCTCATGTTGTGAGGGTTCGATCCCGCACTGACAGGAGGAAGCGTGACCCTCCACAGCGATTCATCAGGCGCAGGGATGATGCACAAAGGCCCGGTCAGCCTGGTCAAGCACCTCGTCCTGCTGGCACAGCAGCACCTGTCCGAACCTAA 390 0.5359 MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYEQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDDAQRPGQPGQAPRPAGTAAPVRT* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1411 129 Gene3D Ribosomal protein S26e 1 115 IPR038551 -
Gso17g1411 129 MobiDBLite consensus disorder prediction 86 129 - -
Gso17g1411 129 Pfam Ribosomal protein S26e 1 106 IPR000892 GO:0003735|GO:0005840|GO:0006412
Gso17g1411 129 MobiDBLite consensus disorder prediction 90 110 - -
Gso17g1411 129 ProSitePatterns Ribosomal protein S26e signature. 73 80 IPR000892 GO:0003735|GO:0005840|GO:0006412
Gso17g1411 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 - -
Gso17g1411 129 PANTHER 40S RIBOSOMAL PROTEIN S26 1 129 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1411 Gso-Chr17 15176497 15178765 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1411 1 116 Cytoplasmic Ribosomal Protein Gene Family AT2G40590 83.621 8.31e-69 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1411 K02976 - gmx:100781822 239.58