Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1410 ATGGCGATTCTTAAAATTCAACACTCTCTGTGCATACTACTTGTTTTTCTCATTCAGTTCTCATCACTGCAGTTACCTTCACACGGGTACACCGTTCCAGATAATTACTTTATCAATTGTGGTTCAGACAGCACTATTAGCGAAAATGGCAAGAATTACGTTCGTGAATCAATCCTTAAAACCAGTTTTGGCAGCAGCAACACGGAAAGAAGCGAGTCGCAGGTGCCTTCTCCTCTTTACCAAACTGCAAGGATTTTTCGAAGTGAGTCTTCGTATGAGTTCAGCATCGACACAAATGGAACCTACCTGGTACGCCTCCATTTCTTCGCTTTCTCTTCGCCTAGTAATCTTTCCTCGGCCAGGTTCAATGTTTCGGTACCTGGTTTCTGGTTGTTGCAAAATTCGGATGTTAGAAATTATACCAATAACAACTCTGCTTTAGTAAAAGAGTTTTACATGCAAATCAGTCCCCCCAGCTTCAGAATCACTTTCAGACCTCTACCATCATCATTTGCGTTTGTGAATGCAATAGAACTCTTCATACTCCCCCTCCATTTGATTTCCAATATTGTCTCGCGTTTCACTTATAGTGCCAATATCGGATCTTTAAACTCCTACAGCGGTCTGTACTCTCGGGTGTTGGAGACCAAACATAGGCTTAATGTTGGTGGTCAAAGGGTCAACGATAGCTTATTGAGAAATTGGAATCCAGATGATAGTTATATCTCAAATAAGGAAAACGCCAAGAATCGTTCCCCTTACCCGGGTCAAATTCTGTACCGTGTAGATGATGACCATGATGGTCCAAACGCAAATAAATTTACTGCGCCAAGTGATGTGTACGGCACTGCTAGAGAGATTAATAACAGCTCTGCTAGTGCCAGAAACATAACATGGGCTCTTCCGGTGGACAACAACACTGATCATCTTCTTCGGCTTCACTTCTGTGACTATTGGAATCCACAAAGTGGTCTTACATACTTCGATCTGTCCATTTACGACACCCATGTTATGTCCGTAAATGATTATAATGACACAGACGTGTCTAAGGAGTTGCCTGCCCCTTATTATTATGATTTTGTGGTGCGCTCTGATAGTTCTGGGTTTATGAAGGTCAGCATAGAACCCGATGCATCCGCCTCCATACCTAATGCATTTTTAAACGGGCTAGAAATAATGAAAGTGATTGAGACATCAAGTTCTGTTCCCCTTGACCTGGGATCCGGTTCAAGTCATAATAGTCTTCCAGTGGTGCTGGGTTCAGTTGTTGGAGGTTTGGTCCTGGTTTTTGTAGTGGTGATACTAGGCTTCCTTTGGCGTTTTAAAATGAGGAAGGAAAAGCCCGTTGAGAATTCAGACTGGTTGCCAATTCCTATTACAGCTGGAGGGAGTTCTCATAGTAGATTGACTGATGGAACCAGCCATGGCTCTCCTCTTCCCAACATAAACCTTGGGCTGAAAATTCCATTGATTGATCTTCAATTGGCAACCAAGAACTTCCACGCAAGTCAGCTAATTGGCAAGGGTGGTTTTGGCAACGTCTACAAGGGAATTCTCAGGAATGGCATGATAGTGGCTGTGAAAAGAAGCCAGCCAGGGTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATCATGGTTTTGTCTAAGATTCGTCACAGGCACCTTGTTTCCCTAATAGGGTATTGTGATGAAAGGTTCGAGATGATACTGGTTTATGAGTACATGGAAAAAGGGACACTCAGGGATCATCTGTATAATACAAAGTTGCCAAGCTTGCCTTGGAAGCAGAGGCTTGAAATTTGCATTGGAGCTGCCAGGGGTCTTCATTACCTTCACAAAGGAGCGGCTGGGGGAATCATTCACCGTGATGTAAAGTCCACAAACATATTGCTTGATGAGAACCTTGTTGCTAAAGTTGCTGATTTTGGCCTTTCAAGGTCAGGTCCTCTTGATACTCAATCCTATGTCAGCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTCAGGTCACAACAGCTGACAGAAAAATCTGATGTATATTCATTTGGGGTGGTTCTTTTGGAAGTGTTGTGTGCAAGAGCAGTGATTGACCCATCACTTCCAAGAGACCAGATAAACTTGGCTGAGTGGGGAATGCTTTGCAAAAACAAGGAGATACTCCAAGAAATAATTGATCCTTCCATCAAGGACCAAATAGATCAAAACTCACTCAGGAAATTTAGTGACACGGTAGAGAAATGCTTGCAAGAAGATGGTTCTGATAGGCCAAGCATGGGTGATGTGTTGTGGGACTTGGAGTATGCGCTGCAGCTTCAGAGAGGTGCAAATGCAATACAAAGAGAGCCTTACGAGGATAGTTCTAGTAGTGTTTCTGCATCACTTCAATTGCCCAATGTTAGGCGCCTTCCTTCACTCTCCACACTAAGTGAAGCAGATGACTCCATTGTGATGGGTGATGAGTCCGATAGTGCTGTGGATTCTGTTTTCTCCCAGTTGAAAATTGATGATGCCAGGTAG 2532 0.434 MAILKIQHSLCILLVFLIQFSSLQLPSHGYTVPDNYFINCGSDSTISENGKNYVRESILKTSFGSSNTERSESQVPSPLYQTARIFRSESSYEFSIDTNGTYLVRLHFFAFSSPSNLSSARFNVSVPGFWLLQNSDVRNYTNNNSALVKEFYMQISPPSFRITFRPLPSSFAFVNAIELFILPLHLISNIVSRFTYSANIGSLNSYSGLYSRVLETKHRLNVGGQRVNDSLLRNWNPDDSYISNKENAKNRSPYPGQILYRVDDDHDGPNANKFTAPSDVYGTAREINNSSASARNITWALPVDNNTDHLLRLHFCDYWNPQSGLTYFDLSIYDTHVMSVNDYNDTDVSKELPAPYYYDFVVRSDSSGFMKVSIEPDASASIPNAFLNGLEIMKVIETSSSVPLDLGSGSSHNSLPVVLGSVVGGLVLVFVVVILGFLWRFKMRKEKPVENSDWLPIPITAGGSSHSRLTDGTSHGSPLPNINLGLKIPLIDLQLATKNFHASQLIGKGGFGNVYKGILRNGMIVAVKRSQPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERFEMILVYEYMEKGTLRDHLYNTKLPSLPWKQRLEICIGAARGLHYLHKGAAGGIIHRDVKSTNILLDENLVAKVADFGLSRSGPLDTQSYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARAVIDPSLPRDQINLAEWGMLCKNKEILQEIIDPSIKDQIDQNSLRKFSDTVEKCLQEDGSDRPSMGDVLWDLEYALQLQRGANAIQREPYEDSSSSVSASLQLPNVRRLPSLSTLSEADDSIVMGDESDSAVDSVFSQLKIDDAR* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1410 843 Pfam Malectin-like domain 38 395 IPR024788 -
Gso17g1410 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Gso17g1410 843 SUPERFAMILY Protein kinase-like (PK-like) 478 771 IPR011009 -
Gso17g1410 843 Gene3D Phosphorylase Kinase; domain 1 473 575 - -
Gso17g1410 843 PANTHER BNAC03G27170D PROTEIN 27 806 - -
Gso17g1410 843 Gene3D Transferase(Phosphotransferase) domain 1 576 794 - -
Gso17g1410 843 PANTHER OS07G0166700 PROTEIN 27 806 IPR045272 GO:0004714|GO:0006468
Gso17g1410 843 ProSitePatterns Protein kinases ATP-binding region signature. 506 528 IPR017441 GO:0005524
Gso17g1410 843 Gene3D - 35 181 - -
Gso17g1410 843 Gene3D - 214 396 - -
Gso17g1410 843 CDD STKc_IRAK 506 771 - -
Gso17g1410 843 Pfam Protein tyrosine and serine/threonine kinase 502 767 IPR001245 GO:0004672|GO:0006468
Gso17g1410 843 ProSiteProfiles Protein kinase domain profile. 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1410 843 SMART serkin_6 500 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1410 Gso-Chr17 15140482 15143388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1410 9 843 Receptor kinase-like Gene Family AT2G23200 44.891 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso17g1410 Malectin_like 2.6e-25 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1410 - - gmx:100305412 1355.5