Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1404 ATGACCTTCATAAGGGAGGATGATGATGATCAAGTTGATGATGATCATGATCATGATCATGTGGATGGTGGTGGATCACAAAACAGTGCCAGCAACATCACTGAAATTGTGACCACCCCAGAAGGGGAAAACTTAGGAGAATGGCTGAGTCTAGGCCTCAAAGGAGACATCAACATGCCAGCAGAAGAACAAAACTCATCATCAAGGCCTCTCCACAGCAACAACAACAAGGTATTCTCATGCAACTTCTGCATGAGAAAGTTTTACAGTTCACAAGCCTTAGGGGGTCACCAGAATGCACACAAGAGGGAGAGAGAAGCTGCTAGAAGCTACCACCAATCTCATCATCACAGAATTGGGTTTTCTTACACTACTTCTCTGGCAACTAGGTCACTGGGAATTAAGCCTCACTCTCTTGTGCACAGGCCTAACAGAGAAAGGTCTGCTATGGTGGCTAGATTCAGTAGTAGTGATGCCATTAATGTTGGGGTTGGATCAGTGGCATCATCATGGACACCCTTTATGCTTGAACAAGCTGTGGATTTCTATTGGCCAGGTAGCTTTCGTGGGGACTTATTGCCAAAGCAAGAATCATCAGATGTTAAGAAGATTGACTTAGATCTTCGGCTCTGA 633 0.4487 MTFIREDDDDQVDDDHDHDHVDGGGSQNSASNITEIVTTPEGENLGEWLSLGLKGDINMPAEEQNSSSRPLHSNNNKVFSCNFCMRKFYSSQALGGHQNAHKREREAARSYHQSHHHRIGFSYTTSLATRSLGIKPHSLVHRPNRERSAMVARFSSSDAINVGVGSVASSWTPFMLEQAVDFYWPGSFRGDLLPKQESSDVKKIDLDLRL* 211
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1404 210 MobiDBLite consensus disorder prediction 98 113 - -
Gso17g1404 210 MobiDBLite consensus disorder prediction 1 31 - -
Gso17g1404 210 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 210 - -
Gso17g1404 210 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Gso17g1404 210 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Gso17g1404 210 Gene3D Classic Zinc Finger 61 126 - -
Gso17g1404 210 MobiDBLite consensus disorder prediction 95 116 - -
Gso17g1404 210 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
Gso17g1404 210 PANTHER ZINC FINGER PROTEIN 4-LIKE 1 210 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso17g1404 Gso-Chr17 15057352 15058615 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1404 75 189 C2H2 Transcription Factor Family AT1G24625 45.968 2.27e-23 91.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1404 - - gmx:732609 411.379
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0872 5 28655103 28656189 Gso17g1404 17 15057352 15058615 GST