Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g1404 | ATGACCTTCATAAGGGAGGATGATGATGATCAAGTTGATGATGATCATGATCATGATCATGTGGATGGTGGTGGATCACAAAACAGTGCCAGCAACATCACTGAAATTGTGACCACCCCAGAAGGGGAAAACTTAGGAGAATGGCTGAGTCTAGGCCTCAAAGGAGACATCAACATGCCAGCAGAAGAACAAAACTCATCATCAAGGCCTCTCCACAGCAACAACAACAAGGTATTCTCATGCAACTTCTGCATGAGAAAGTTTTACAGTTCACAAGCCTTAGGGGGTCACCAGAATGCACACAAGAGGGAGAGAGAAGCTGCTAGAAGCTACCACCAATCTCATCATCACAGAATTGGGTTTTCTTACACTACTTCTCTGGCAACTAGGTCACTGGGAATTAAGCCTCACTCTCTTGTGCACAGGCCTAACAGAGAAAGGTCTGCTATGGTGGCTAGATTCAGTAGTAGTGATGCCATTAATGTTGGGGTTGGATCAGTGGCATCATCATGGACACCCTTTATGCTTGAACAAGCTGTGGATTTCTATTGGCCAGGTAGCTTTCGTGGGGACTTATTGCCAAAGCAAGAATCATCAGATGTTAAGAAGATTGACTTAGATCTTCGGCTCTGA | 633 | 0.4487 | MTFIREDDDDQVDDDHDHDHVDGGGSQNSASNITEIVTTPEGENLGEWLSLGLKGDINMPAEEQNSSSRPLHSNNNKVFSCNFCMRKFYSSQALGGHQNAHKREREAARSYHQSHHHRIGFSYTTSLATRSLGIKPHSLVHRPNRERSAMVARFSSSDAINVGVGSVASSWTPFMLEQAVDFYWPGSFRGDLLPKQESSDVKKIDLDLRL* | 211 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g1404 | 210 | MobiDBLite | consensus disorder prediction | 98 | 113 | - | - | |
Gso17g1404 | 210 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Gso17g1404 | 210 | PANTHER | ZINC FINGER PROTEIN 4-LIKE | 1 | 210 | - | - | |
Gso17g1404 | 210 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 81 | 101 | IPR013087 | - | |
Gso17g1404 | 210 | SUPERFAMILY | beta-beta-alpha zinc fingers | 75 | 106 | IPR036236 | - | |
Gso17g1404 | 210 | Gene3D | Classic Zinc Finger | 61 | 126 | - | - | |
Gso17g1404 | 210 | MobiDBLite | consensus disorder prediction | 95 | 116 | - | - | |
Gso17g1404 | 210 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 79 | 106 | IPR013087 | - | |
Gso17g1404 | 210 | PANTHER | ZINC FINGER PROTEIN 4-LIKE | 1 | 210 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g1404 | Gso-Chr17 | 15057352 | 15058615 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g1404 | 75 | 189 | C2H2 Transcription Factor Family | AT1G24625 | 45.968 | 2.27e-23 | 91.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g1404 | - | - | gmx:732609 | 411.379 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso5g0872 | 5 | 28655103 | 28656189 | Gso17g1404 | 17 | 15057352 | 15058615 | GST |