Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1387 ATGACAATCATAATTACCATTGGGTCTTCTTGCTCAAGATCGAATCTTGTGAAGTCGACATCGGTGAACGTATTTGGTGGGATTGATCTCCTCAAGCCCGCTGCAATTGGGAAGTCTTCAGTGCTTCATTCACAACCAAAGTCAACTGTGGGAACTCCTGCATATATTGCTCCAGAAGTATTGTTGAAACAAGAGTATGATGGCAAGCTTGCAGATGTCTGGTCATGTGGAGTAACGTTATATGTGATGCTAGTGGGAGCATATCCTTTTGAAGATCCTAATGAACCAAAGGACTTTCGCAAGACAATTCAGAGAGTTCTTAGTGTCCAGTATTCCATTCCGGGCGGTGTTCAAATATCTCCAGAGTGTGGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCAGCAGAGGCATTTTCCTTCTCCAAGGAACATTTATTCAATTTACATTTGGCTTAA 459 0.4227 MTIIITIGSSCSRSNLVKSTSVNVFGGIDLLKPAAIGKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKLADVWSCGVTLYVMLVGAYPFEDPNEPKDFRKTIQRVLSVQYSIPGGVQISPECGHLISRIFVFDPAEAFSFSKEHLFNLHLA* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1387 152 SMART serkin_6 1 147 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1387 152 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 37 140 - -
Gso17g1387 152 Pfam Protein kinase domain 40 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1387 152 PANTHER SERINE/THREONINE KINASE 37 140 - -
Gso17g1387 152 Gene3D Transferase(Phosphotransferase) domain 1 15 148 - -
Gso17g1387 152 SUPERFAMILY Protein kinase-like (PK-like) 46 141 IPR011009 -
Gso17g1387 152 ProSiteProfiles Protein kinase domain profile. 1 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1387 Gso-Chr17 14646330 14654365 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1387 33 140 CBL-interacting serine-threonine protein kinases AT5G10930 44.444 1.72e-22 90.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Gso17g1387 Pkinase 3.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1387 K14498 - gsj:114391477 306.219