Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1374 ATGACGCAATTCACACCCCCACTTCCTCCTTTGCACCACCAAATCACATCCCTCCTCCCAAACCCTAACATGATGAACAAAAACCAAATCCCTAGGCCTAGGCCTTGGCCTGCTTCAGGCTTCCCTACTACCTCCAAGGCCCTTTCCAACTTGGGCGACGCGAACTGCATGGAACAGTTACTTGTTCACTGCGCCAACGCTATTGAAACCAACGACGTAACCCTCGCACAACAGATCCTTTGGGTGCTTAACAACATAGCCCCCCATGATGGCGACTCCAATCAACGCCTCGCCTCTGGCTTCCTCCGCGCCCTCACTGCACGTGCCGCCAAAACCGGCACGTGCAAGATGCTCGTCTCCGCCGGCACCAACCTCTCCATCGACACGCACAGATTTAACATCATTGAGCTCGCTAACTTCGTCGACCTAACCCCGTGGCACCGCTTCGGCTTCACCGCCGCCAACGCCGCCGTCTTGGAAGCCACCGAAGGGTTCTCCGTTGTACATATTGTGGACTTGAGCTTGACGCATTGCATGCAAATTCCCACACTTGTCGACGCCATCGCCAGCCGCCAGCACCACGACGCGTCGCCGCCGATAATCAAGCTCACGGTGGCCGACGCTTGCTGCAGGGACCACATCCCTCCCATGCTCGATCTCTCCTACGAGGAACTCGGCGCCAAGCTGGTGAGTTTCGCTCGGTCGAGAAACGTGATCATGGAATTCAGAGTGGTTTCTTCGAGTTATCAAGACGGGTTCGCGAGTTTGATCGAACATTTAAGAGTGCAACAAGAACAACAACAGCATTTTGTTTATGCAGCAGAACCTAGTACTCCGAGTGAGGCTTTGGTTATAAACTGTCACATGATGCTTCATTACATCCCCGACGAAACCCTATCAGATACAACAGACTTAACCTCTTATGTCTACGATTCTTCTTCTTCTGCTGCCGTTAGTGTTACTCCCACTTCTTCACTGCGATCACTGTTCCTTAAGTCCCTGCGAGGTTTAGACCCAACGGTCGTGATCTTGGTCGACGAAGACGCGGATTTGACATCAAACAACTTGGTATGCAGACTAAGATCAGCATTTAACTTCCTATGGATCCCTTACGACACCGTGGACACGTTCTTGCCGCGAGGGAGCAAGCAGAGACAGTGGTACGAGGCAGACACATGCTGGAAGATTGAGAATGTGATTGCACACGAAGGGCTTCAGAGGGTGGAGAGGGTAGAACCTAAGAACAAGTGGGAGGAGCGAATGAAGAATGCGAGTTTTCAAGGGGTTGGTTTCAGTGAAGACTCTGTTGCAGAAGTGAAGGCAATGCTCGATGAACATGCTGCTGGGTGGGGATTGAAGAAGGAAGATGAACACATTGTGCTCACTTGGAAAGGACACAATGTAGTCTTTGCCTCTGCTTGGTTACCTGCTTGA 1434 0.5188 MTQFTPPLPPLHHQITSLLPNPNMMNKNQIPRPRPWPASGFPTTSKALSNLGDANCMEQLLVHCANAIETNDVTLAQQILWVLNNIAPHDGDSNQRLASGFLRALTARAAKTGTCKMLVSAGTNLSIDTHRFNIIELANFVDLTPWHRFGFTAANAAVLEATEGFSVVHIVDLSLTHCMQIPTLVDAIASRQHHDASPPIIKLTVADACCRDHIPPMLDLSYEELGAKLVSFARSRNVIMEFRVVSSSYQDGFASLIEHLRVQQEQQQHFVYAAEPSTPSEALVINCHMMLHYIPDETLSDTTDLTSYVYDSSSSAAVSVTPTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNFLWIPYDTVDTFLPRGSKQRQWYEADTCWKIENVIAHEGLQRVERVEPKNKWEERMKNASFQGVGFSEDSVAEVKAMLDEHAAGWGLKKEDEHIVLTWKGHNVVFASAWLPA* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1374 477 PANTHER SCARECROW-LIKE PROTEIN 32 32 475 - -
Gso17g1374 477 MobiDBLite consensus disorder prediction 18 42 - -
Gso17g1374 477 Pfam GRAS domain family 57 474 IPR005202 -
Gso17g1374 477 ProSiteProfiles GRAS family profile. 48 475 IPR005202 -
Gso17g1374 477 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 32 475 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1374 Gso-Chr17 14482534 14484872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1374 25 476 GRAS Transcription Factor Family AT3G49950 56.264 8.71e-177 500
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso17g1374 GRAS 2.6e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1374 - - gmx:100808898 910.983