Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1371 ATGGAGAAAGCAATGAAGGAGATTGACTCTATCATTGGCAAAGACAGAATGGTAATGGAAACATATATAGATAATCTTAGTTATCTCCAAGCCATAGTGAAGGAGACACTGAGGCTTCACCCTCCATCTCTATTTGTATTGAGAGAGTCAACTGGAAATTGCACCATTGCTGGATATGACATTCCAGCAAAGACTTGGGTTTTCACTAATGTGTGGGCTATTTGTAGGGATCCAAAGCACTGGGATGACCCTCTTGAGTTTAGACCTAAAAGGTTTCTTAACAATGATAATGAGAGAAAAAAAATGGGTCAAGTTGGGGTCAGGGTACAACATTATCAACTTTTGCCTTTTGGGAGTGGAAGAAGAGGGTGTCCTGGAGCTTTGCTAGCACTAAAGGTTGCTCACACCACCCTTGCTGCTATGATTCAATGCTTTGAATTGAAGGCTGAAGAAAAAGAAGGGTATTATGGTTGTGTTGACATGGAAGAGGGACCTTCCTTTATTCTTTCAAGAGCTTAA 519 0.4085 MEKAMKEIDSIIGKDRMVMETYIDNLSYLQAIVKETLRLHPPSLFVLRESTGNCTIAGYDIPAKTWVFTNVWAICRDPKHWDDPLEFRPKRFLNNDNERKKMGQVGVRVQHYQLLPFGSGRRGCPGALLALKVAHTTLAAMIQCFELKAEEKEGYYGCVDMEEGPSFILSRA* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1371 172 Gene3D Cytochrome P450 1 165 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1371 172 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 171 - -
Gso17g1371 172 PRINTS E-class P450 group I signature 30 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1371 172 PRINTS E-class P450 group I signature 70 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1371 172 PRINTS E-class P450 group I signature 114 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1371 172 PRINTS E-class P450 group I signature 124 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1371 172 SUPERFAMILY Cytochrome P450 1 169 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1371 172 PRINTS P450 superfamily signature 31 42 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1371 172 PRINTS P450 superfamily signature 115 124 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1371 172 PRINTS P450 superfamily signature 124 135 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1371 172 Pfam Cytochrome P450 1 151 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1371 172 PANTHER CYTOCHROME P450 93A2 1 171 - -
Gso17g1371 172 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 117 126 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1371 Gso-Chr17 14323908 14324426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1371 1 172 Cytochrome P450 AT5G06900 47.674 3.55e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1371 K24188 - gsj:114391469 358.607