Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1364 ATGGGAGAGTCTGAGTTTGTTCCTTCGGTGGCTGTGAGTGTGAGAGAGTTTGATCCAACTAAAGACATAGAGAAAGTGGAAGCCGTTGAAAGAATATGTGAGGTTGGACCCAGTGGAAAGCTTTCCCTCTTCACCGACCTCCATGGTGACCCAATTTGCAGGGTCCGCAACTCACCTACTTTCCTCATGCTGATAGCCGAAATTGGCCAAGAGACAGTAGGAATGATAAGAGGTTGCATCAAAACCGTTACTTGCGGAAAAAAGCTCCACAGGCAAGGAAAAAACAACACCGAGCCAAAACAAGTCCCTATTTACACCAAACTAGCCTACATATTAGGCCTTCGTGTTTCTCCACATCACAGGAGAATGGGAATAGGGATGAAGCTTGTGAAGAAAATGGAGGAATGGTTCAGGGATAACGGGGCAGAGTATGCATACATGGCTACGGAGAAGGACAACGTTGCATCCGTCAAGTTGTTCACCGACAAATGTGGGTACTCAAAGTTTCGTACCCCCTGCATTCTCGCGAATCCTGTTTTCTCGCATCCTGCTAGAATCTCTCACAAAGTGACTATCATTGAACTCTCTCCGAGCGATGCCGAAATACTCTACCGCAGCAAGTTTTCCACAACGGAGTTCTTCCCGCGCGACGTAGACTCCGTTCTCCGTAATAAGCTCTCCTTAGGCACTTTTCTTGCCGTCCCCAAAGGCTTGTACCGGGCTGACACGTGGCCCGGCTCAACCCGCTTTCTTGAGGGTCCACCACCCTGTTCTTGGGCCCTAGTCAGTGTGTGGAACTGCAAGGACGTGTTCACACTGGAGGTAAAAGGTGCTTCGCGCGTGAAGAAGACGCTCGCCAAGACCACTCGCGTCCTCGATCGTGCCTTCCCCTGGCTGCGCTTGCCCTCCGTTCCTAATTTCTTTGAGCCCTTCGGGTTTCATTTTTTGTATGGGCTTGGAGGAGAGGGCCCGCAGGCCCAGAAGATGATCCGGGCTTTGTGCGGGTTTGCCCATAACCTCGCCCGGGATCGCGGCTGTGAGGTTGTGGCCACCGAAGTTTCAAGCCAAGAACCGTTACGGTGCGCTATCCCGCACTGGAAAATGCTCTCATGCGAAGAAGATCTGTGGTGCATTAAGAGATTAGGAGAAGATTACAGTGATGGCTCTCTGGGTGATTGGACTAAATCCCCTCCAGGCTTCTCAATTTTTGTTGATCCCAGAGAAGTTTGA 1230 0.5081 MGESEFVPSVAVSVREFDPTKDIEKVEAVERICEVGPSGKLSLFTDLHGDPICRVRNSPTFLMLIAEIGQETVGMIRGCIKTVTCGKKLHRQGKNNTEPKQVPIYTKLAYILGLRVSPHHRRMGIGMKLVKKMEEWFRDNGAEYAYMATEKDNVASVKLFTDKCGYSKFRTPCILANPVFSHPARISHKVTIIELSPSDAEILYRSKFSTTEFFPRDVDSVLRNKLSLGTFLAVPKGLYRADTWPGSTRFLEGPPPCSWALVSVWNCKDVFTLEVKGASRVKKTLAKTTRVLDRAFPWLRLPSVPNFFEPFGFHFLYGLGGEGPQAQKMIRALCGFAHNLARDRGCEVVATEVSSQEPLRCAIPHWKMLSCEEDLWCIKRLGEDYSDGSLGDWTKSPPGFSIFVDPREV* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1364 409 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 47 168 IPR016181 -
Gso17g1364 409 CDD NAT_SF 63 146 - -
Gso17g1364 409 Pfam Acetyltransferase (GNAT) family 56 166 IPR000182 GO:0016407
Gso17g1364 409 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 10 408 - -
Gso17g1364 409 PANTHER N-ACETYLTRANSFERASE 10 408 - -
Gso17g1364 409 Gene3D - 20 172 - -
Gso17g1364 409 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 185 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1364 Gso-Chr17 14088478 14090674 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso17g1364 Acetyltransf_1 2.8e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1364 - - gmx:100804109 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0906 5 29691225 29693288 Gso17g1364 17 14088478 14090674 GST
Gso1g1658 1 53256808 53258909 Gso17g1364 17 14088478 14090674 PCT
Gso11g0421 11 3698231 3700317 Gso17g1364 17 14088478 14090674 PCT
Gso17g1364 17 14088478 14090674 Gso1g1658 1 53256808 53258909 PCT
Gso17g1364 17 14088478 14090674 Gso11g0421 11 3698231 3700317 PCT