Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1361 ATGAAAGCTCATCATCATTTGAGCTTCTTTTTTATAATATCATCGTTCTCTCTATTCTTCTCCACTTCCAAAGCTACTATTACCAACACAACTCAATTATCCTCTTACAATGAAACAAGAACAAGAAGGATTCTCCACCAGCCATTGTTCCCGGCGGTGTCGGCTCCACCGCCGGTTACTCCACCGCCGCCACCACCACCGGACATTCCGTCCTCTCCCGACATTCCTTTCTTCAACGAGTATCCCGCCGGGCAGCCGCCTCCCGTGCAGAACCTGCCGCCGGCGAAGACCTCCGGCGGCGTGATTGCGAACCCGACGGCGACGCAGCCAACGAAACCGGGGAAGAAGGTGGCGATTGCGATCTCCGTGGGCATTGTTACACTTGGAATGTTCTCCGCATTGGGCTTCTTCTTATACAGACACAGAGTAAGACACCCGGCGGAGACACAGAAACTTGTTTCTCGCAGGGTTCTAGAAGATTCTCCGCGGGCCCCACCGCTGCCACCACCCTCGAGTTTTCTCTACATTGGCACGGTGGAGCCCGCCAGAACTTCGCTGAGCGAACCCAACAGAATGACCGTTAACACTTCCCCTTACCGGAAACTTGATTCCATTAAGCTTAGCTCCGATCACCGTTACCGCCCCAGCCCAGAGCTGCAGCCGCTTCCGCCGCCGCACAAGCCCCCGGACGAGAGCCACTCGCCGCCGGCGGAATTCTCTGACTCGTCATCGTCCTCCGAGGAGGAAAGCTGCGAGACGGCGTTCCACTCGCCGCGCGGCTCGTCGCTCGGCCGCGAAGAGAATTTCTTCACGCCGGTCTCGCGCCACAGCTGTCTCTCCGCCGCCGCGTCGGTGGTTCCTTACTCGAAGAGAACTTCGCCGAAATCCCGGTTTTCGGCCCCGTCGCCGGATATCAGAAACATGGTCGTCCCGTCCGTTAGGCCTTCTCCGGCAGAATTACCGGCGCCGGCAGATTCAACAACATTTCATCCCGTGAAAAAAGAAATGACTTTGGGTCCATCTAGAAGACCCAAATTCTCATCGCATCCCCCAGCACCGAATTTGACTCATCTTCATTCAAACGAGTCCACTACTTCACTTAAACCTCCTCCTCCTCCTCCGCCACCGCCGCCGCCACCACTTCCGTCGCGAAAGGGTTGGTCTCCGTCAATTAGTTCATCTTCTTCCTCTGTGTCGAGGAAGAACCGAGAGTCATGGTCCCCATATGAAGGAGAATCTTCTGGTAACAGTGTTAGTGTAAGGAAAGGTCCTTCTTCTGAGGAAGTTTACAAAAGGCGTGAAGGTGATGACGTGGATGGAGCAAAACCCAAGTTGAAGGCTCTGCATTGGGATAAAGTGTCTGCTACTTCGGACCGTGCCACTGTGTGGGACCAGTTAAAATCCAGCTCCTTTCAGTTAAATGAGGACATGATGGAGACACTGTTTGGCTGCAAATCCACAGGTTCTGCTTTTAAAGAGAGTGTTACTAGAAGATCAGTTCTTCCTCCTGTTGAACCGGAGAATAGGGTGTTGGATCCCAAGAAATCTCAAAACATAGCTATACTTCTCAGGGCACTCAACGTGACAAGAGATGAGGTGTGCGAAGCTCTTTTAGATGGGAATCCTGAAGGTTTGGGAACTGAGCTATTGGAGACTCTAGTGAAGATGGCTCTAACAAAGGAGGAAGAAATAAAACTTAAAAATTATGATGGTGACCTCTCAAGACTTGGATCTGCAGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTAGCTTTTAAGAGAATTGAAGCCATGCTGTACAGAGCTAATTTTGAAACTGAAGTTAACTACCTTAGGAAGTCCTTTCAGACCCTGGAGGCAGCAAGTGAGGAATTAAAGAACAGTCGGTTATTCCTCAAACTTCTTGAAGCTGTTCTAAGGACAGGAAACAGAATGAATGTTGGCACAAATCGCGGTGGCGCTAAATCTTTCAAACTGGACACACTTCTAAAACTTGTAGACATAAAGGGCACAGATGGCAAGACAACACTGCTCCACTTTGTGGTTCAAGAGATCATTAGATCCGAAGGAACAGGCGGAGAATCTGCAGACGAGAATGTTCAAAACCAATCAAATTCCCAATTCAACGAGGATGAGTTCAGAAAGAAAGGATTGCAGGTTGTGGCTGGACTGAGTAGAGACCTTGGTAATGTCAAAAAGGCAGCAGGAATGGATTCGGATGTTTTAAGCAGCTATGTCTCAAAGCTTGAAATTGGACTTGACAAAGTGAGATTAGTTTTGCAATGTAGAAAGCCAGATATGCACGGGAATTTCTTTAACTCGACCGCACTGTTTCTGAAAGATGCTGAAGAGGAAATTGTTAGGATCAAGGCTGATGAGAGAAAGGCCTTGTTCCTTGTGAAAGAAGTTACAAAATACTTTCACGGGGATGCAGCAAAGGAAGAAGCGCACCCTTTCCGAATTTTTATGGTTGTAAGAGACTTTCTAAATAGTTTGGATCAAGTCTGCAAAGAAGTGGGGAGGATGCAGGATAGGACTGTGATTGGTTCAGCTAGATCCTTCAGGATAGCCGCAAGTGCATCCTTACCTGTTCTCAACAAGTACCATGCAAGACAAGATAGAAGTTCAGATGAGGAAGGCTTATCCCCCTAG 2655 0.49 MKAHHHLSFFFIISSFSLFFSTSKATITNTTQLSSYNETRTRRILHQPLFPAVSAPPPVTPPPPPPPDIPSSPDIPFFNEYPAGQPPPVQNLPPAKTSGGVIANPTATQPTKPGKKVAIAISVGIVTLGMFSALGFFLYRHRVRHPAETQKLVSRRVLEDSPRAPPLPPPSSFLYIGTVEPARTSLSEPNRMTVNTSPYRKLDSIKLSSDHRYRPSPELQPLPPPHKPPDESHSPPAEFSDSSSSSEEESCETAFHSPRGSSLGREENFFTPVSRHSCLSAAASVVPYSKRTSPKSRFSAPSPDIRNMVVPSVRPSPAELPAPADSTTFHPVKKEMTLGPSRRPKFSSHPPAPNLTHLHSNESTTSLKPPPPPPPPPPPPLPSRKGWSPSISSSSSSVSRKNRESWSPYEGESSGNSVSVRKGPSSEEVYKRREGDDVDGAKPKLKALHWDKVSATSDRATVWDQLKSSSFQLNEDMMETLFGCKSTGSAFKESVTRRSVLPPVEPENRVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELLETLVKMALTKEEEIKLKNYDGDLSRLGSAERFLKAVLDIPLAFKRIEAMLYRANFETEVNYLRKSFQTLEAASEELKNSRLFLKLLEAVLRTGNRMNVGTNRGGAKSFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEGTGGESADENVQNQSNSQFNEDEFRKKGLQVVAGLSRDLGNVKKAAGMDSDVLSSYVSKLEIGLDKVRLVLQCRKPDMHGNFFNSTALFLKDAEEEIVRIKADERKALFLVKEVTKYFHGDAAKEEAHPFRIFMVVRDFLNSLDQVCKEVGRMQDRTVIGSARSFRIAASASLPVLNKYHARQDRSSDEEGLSP* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1361 884 MobiDBLite consensus disorder prediction 286 300 - -
Gso17g1361 884 SUPERFAMILY Formin homology 2 domain (FH2 domain) 370 845 - -
Gso17g1361 884 PANTHER FORMIN-LIKE PROTEIN 4 884 - -
Gso17g1361 884 MobiDBLite consensus disorder prediction 366 385 - -
Gso17g1361 884 PANTHER FORMIN-RELATED 4 884 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso17g1361 884 MobiDBLite consensus disorder prediction 285 440 - -
Gso17g1361 884 MobiDBLite consensus disorder prediction 186 268 - -
Gso17g1361 884 MobiDBLite consensus disorder prediction 386 423 - -
Gso17g1361 884 Pfam Formin Homology 2 Domain 440 833 IPR015425 -
Gso17g1361 884 Gene3D Formin, FH2 domain 437 845 IPR042201 -
Gso17g1361 884 MobiDBLite consensus disorder prediction 236 257 - -
Gso17g1361 884 SMART it6_source 435 848 IPR015425 -
Gso17g1361 884 MobiDBLite consensus disorder prediction 425 440 - -
Gso17g1361 884 ProSiteProfiles Formin homology-2 (FH2) domain profile. 435 859 IPR015425 -
Gso17g1361 884 MobiDBLite consensus disorder prediction 186 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1361 Gso-Chr17 13997187 14002210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1361 433 874 FH2 protein (formin) Gene Family AT5G67470 73.767 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1361 - - gmx:100803578 1554.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0909 5 29774563 29779871 Gso17g1361 17 13997187 14002210 GST
Gso1g1661 1 53284321 53289723 Gso17g1361 17 13997187 14002210 PCT
Gso11g0419 11 3665725 3671008 Gso17g1361 17 13997187 14002210 PCT
Gso17g1361 17 13997187 14002210 Gso1g1661 1 53284321 53289723 PCT
Gso17g1361 17 13997187 14002210 Gso11g0419 11 3665725 3671008 PCT