Home
Resource
Genome
JBrowse
Transcriptome
Metabolomics
Pan-genome
External database links
Search
Annotation
Pathway
Duplication type
Transposable elements
Regulatory proteins (RPs)
N6-methyladenosine (m6A)
Browse
Syn-based OGs
Gene-families
Synteny
Syn-Blocks
Syn-Dotplots
Deco-Alignments
Pvu_syntenic
Vvi_syntenic
WGDs- Genes
Anc-Genome
Anc-Reference
Tools
All tools
Genome browsing and annotation
Jbrowse
ShinyCircos
Interproscan
iTAK
Dupgen finder
Homology search and alignment
Bl-match
Seq-fatch
Blast
Diamond
Bi-visualazition
Synteny inference
MCScanX
ColinearScan
Synviso
Syn-blocks-stat
B-Dotter
BB-Dotter
BK-Dotter
Evaluation of nucleotide mutation
ParaAT
KaKs calculator
NG-KaKs-Cal
Paleogenome fractionation
Paleo-gene identifier
Syn-deco generator
Paleo-gene_RI
Paleo-gene_RII
P-index-calculator
Multi-syn-phytre
Gene structure and evolution
Codonw
Cpgfinder
MEME
GSDS
Hmmer
Pfam
FastTree
IQ-Tree2
Multigene-align
Heatmap
Lollipop
Gmapping
GF-Circos
Other auxiliary tools
GC-calculator
Seqlenth-calculator
Genstr-counter
Gam-Calculator
SAF-converter
BDI-finder
BDI-deduplicator
BDI-extractor
BDI-combiner
Seq-corrector
Subtree-splitter
Sptaxon-accessor
SS-extractor
WinO-WGDI
Block_run
KaKs calculate
Blast dotplot
Ks dotplot
Block_info
Correspondence
Statistics
Overview
Phylogenetic tree
Identification of polyploidy
Bar chart
Heatmap
Gene function annotation
Functional genes
Transcription factor
N6-methyladenosine(m6A)
Bar chart
Heatmap
Transposable elements
Documentation
Platform Manual
Pipeline flow examples
L-Wikipedia
Species introduce
Literatures
Common pests
Diseases
Economic value
Planting methods
About
Submission
Community
Contact
Gene search
Sequence information
Show
10
25
50
100
entries
Search:
Select
Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gso17g1355
ATGGATACCTTGTTTAGACTAGTAAGTTTTCATCAACAGCAACAACCACAACAACAACCTGATCCATCCCTCAACTCCACCACCAGCAGAACCTCCAGCAGCTCCAGATCCTCCAGACAAAACTACTACCCTTATTCCCATCAAGAAGAAGAAGAATGCTTCAACTTTTACATGGATGAAGAAGACTTATCCTCGTCTTCTTCCAAACACTACTACCACCCTTATCAACCCCATCATCATCAACAACACAACGTATCCAACATTTCTACAAACACCTTCAGCACCACCCCTAACACTGATTACTCCTACTCCTACTCCTTCTCTCCCACGCAACCTGTTCAAGACTTCAACTTCGAATTCTCCTCCCCCAACTGGTCCCACAACCTCCTCCTCGAATCCGCACGCGCCGTCGCCGACAACAACTCCACGCGCCTCCACCACCTCCTCTGGATGCTCAACGAGCTCAGCTCCCCCTACGGCGACACCGAACAAAAACTTGCTGCGTATTTCCTCCGAGCCTTGTTCAGCCGCGTCACCGAAGCTGGCGACCGAACCTACCGAAGCTTAGCTTCGGCGTCTGAGAAAACATGCTCATTTGAATCCACAAGAAAAACGGTCCTGAAATTCCAAGAAGTTAGCCCTTGGACTACCTTCGGACACGTGGCATCCAATGGCGCCATCTTGGAAGCCTTGGAGGGAAACTCCAAATTGCATATACTTGACATCAGCAACACTTATTGCACCCAGTGGCCAATGCTTCTGGAAGCATTGGCCACTCGGAGCGAAGAAACTCCACACCTATGTTTAACAACAATTGTTACTGGTTCTAGAATCGGTAACAACGTCCAGCGCGTGATGAAGGAAATCGGAACGCGAATGGAGAAATTCGCCAGACTCATGGGCGTTCCTTTTAAGTTCAACGTCGTTCATCACTACGGCGATCTATCCGAGTTCAATTTCTCAGAGCTTGATATCAAAGACGATGAGGCTTTGGCTGTGAATTGTGTGAACTCGCTGCATTCGGTTTCCGCGCTAGGAAACAACCGCGACGCGTTGATATCGGCGTTGCAAGCGTTGCAGCCGCGGATTGTGACGGTGGTGGAGGAGGAGGCTGATTTGGACGTTGGAATCGACGGTTACGAGTTCGTAAAAGGCTTTGAAGAAAGTTTGAGGTGGTTTAGGGTTTACTTTGAGGCTTTGGATGAGAGTTTTGTGAAGACGAGCAACGAGAGGCTGATGCTGGAGCGCGCGGCGGGGAGGGCGGTGGTGGACCTGGTGGCGTGCTCGCCGGCGGATTCCGTGGAGCGCCGCGAGACGGCGGCGCGGTGGGCGGCGAGGCTTCACAACGGAGGGCTAAACGCGGCGCCGTTTAGCGACGAAGTTTGCGACGACGTGAGGGCGCTGTTGAGGAGGTACAAGGAAGGGTGGTCGATGGCGGCGTGCTCCGACGCCGGAATATTCCTCTCGTGGAAGGACACGCCGGTGGTGTGGGCCAGTGCATGGAGGCCATAA
1512
0.5265
MDTLFRLVSFHQQQQPQQQPDPSLNSTTSRTSSSSRSSRQNYYPYSHQEEEECFNFYMDEEDLSSSSSKHYYHPYQPHHHQQHNVSNISTNTFSTTPNTDYSYSYSFSPTQPVQDFNFEFSSPNWSHNLLLESARAVADNNSTRLHHLLWMLNELSSPYGDTEQKLAAYFLRALFSRVTEAGDRTYRSLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGNSKLHILDISNTYCTQWPMLLEALATRSEETPHLCLTTIVTGSRIGNNVQRVMKEIGTRMEKFARLMGVPFKFNVVHHYGDLSEFNFSELDIKDDEALAVNCVNSLHSVSALGNNRDALISALQALQPRIVTVVEEEADLDVGIDGYEFVKGFEESLRWFRVYFEALDESFVKTSNERLMLERAAGRAVVDLVACSPADSVERRETAARWAARLHNGGLNAAPFSDEVCDDVRALLRRYKEGWSMAACSDAGIFLSWKDTPVVWASAWRP*
504
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Annotation information
Show
10
25
50
100
entries
Search:
Select
Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gso17g1355
503
PANTHER
PROTEIN SHORT-ROOT
1
502
IPR030019
GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Gso17g1355
503
Pfam
GRAS domain family
128
502
IPR005202
-
Gso17g1355
503
PANTHER
OSJNBA0084A10.13 PROTEIN-RELATED
1
502
IPR005202
-
Gso17g1355
503
MobiDBLite
consensus disorder prediction
8
43
-
-
Gso17g1355
503
ProSiteProfiles
GRAS family profile.
117
502
IPR005202
-
Showing 1 to 5 of 5 entries
Previous
1
Next
Select All
Download Selected Rows
Duplication type information
Show
10
25
50
100
entries
Search:
Select
Gene
Chromosome
Start
End
Duplicated_type
Gso17g1355
Gso-Chr17
13951192
13953114
Dispersed/Wgd
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Functional genes information
Show
10
25
50
100
entries
Search:
Select
Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gso17g1355
1
503
GRAS Transcription Factor Family
AT4G37650
57.303
0.0
568
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Transcription factors information
Show
10
25
50
100
entries
Search:
Select
Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
GRAS
Gso17g1355
GRAS
6.9e-102
CL0063
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Pathway information
Show
10
25
50
100
entries
Search:
Select
Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gso17g1355
-
-
gmx:100814082
970.304
Showing 1 to 1 of 1 entries
Previous
1
Next
Select All
Download Selected Rows
Event-related genes
Show
10
25
50
100
entries
Search:
Select
Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gso5g0914
5
29886947
29888963
Gso17g1355
17
13951192
13953114
GST
Gso1g1670
1
53360702
53363012
Gso17g1355
17
13951192
13953114
PCT
Gso11g0411
11
3594334
3596435
Gso17g1355
17
13951192
13953114
PCT
Gso17g1355
17
13951192
13953114
Gso1g1670
1
53360702
53363012
PCT
Gso17g1355
17
13951192
13953114
Gso11g0411
11
3594334
3596435
PCT
Showing 1 to 5 of 5 entries
Previous
1
Next
Select All
Download Selected Rows