Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1350 ATGGCGGCTTTGTCTTCGAGCTGTAGCACATCCCTTCCCAAAATTTCCTCCCATCGATTCAATTTCTATCCACACCACCTAAATTTACCTCCTTGGCCCCCAAAATCAATGCCAAACAATCCCTTATCACTCTCAACAACTTGCAAACGCCGCAACGTGTTCAGCGAAGAATTCAACGGAAGCGTGGCAGAAGAGGAGAGTTTCAGCTCCATGGACGACAAGCAATTCGTGCGTTGGTTCCGCGAGACGTGGCCTTACTTGTGGGCCCACCGTGGCGCTACCTTCGTTGTCATTATTTCCGGTGAAATTGTCACTAGTCCCTTATTGGATCCCATTCTCAAGGATATAGCCTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATGTGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGACAGCCTAAGTATGTTGGTCCATATAGGATAACTGATGATGAGTCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGATTGATGATTGAAGCAAAGCTTTCTCCTGGACCCTCCATTTACAATATTCGTCGACATGGTGACAATAGCCGTTTGCATGAAGTTGGTGTCAGTGTTGCAAGTGGGAACTTTCTTGCAGCCAAGAGAAGAGGGGTTGTCAAAGGAATTGATTTTGGGTCAACTGGGGAGGTTAAAAAAGTAGATATTTCTCGCATGCGTGAGAGGCTTGATGGCAACTGTATTGTTATTTTAAGCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAATGCCTATGAAGTTGCGACAGCTTGTGCCTTGGCTGTACGAGCTGACAAGCTTATATGCATTACAGATGGTCCAATACTGGATGAAAGTGGACACCTTATTCGTTTCTTGCCTCTTCAAGAGGCAGACATGCTAATTCGTAAACAGGTTGAGGAAAGTGAAACAGCTGCTAACTATGTGAAAGCTGTTGCTGAAGAAAGTTTCAAGTCTCTTAAAAATTTTAATGGGGCAGTCCATTCTCCACGGAACGGAAAACCATTTTCAGAATATCATAATTCAACCTTTCATAATGGTGTTGGTTTTGACAATGGGAATGGCCTATCTGGGAAGCATGGTTTTGCTATTGGAGGTCAAGAGTCACTAAGTCGAACGAATGGTTACCTGTCAGAACTGGCTGCTGCAGCCTTCGTTTGTAGAGGTGGTGTTCAAAGAGTTCATTTGTTGGATGGCACTATTAGTGGAGTTCTGTTGTTGGAACTGTTCAAGAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGGATGGCTCAAGTAACAGATTTTTCTGGAATAAAACAACTTATCCAGCCTTTGGAGGAATCTGGTATATTAGTTAAGCGGACTGATGAAGAGCTGCTTCAATCATTAGGCTCCTTCATTGTTGTTGAGAGAGAAGGACAGATAATTGCTTGCGCTGCACTTTTTCCTTTCTTTGAGGAGAAGTGTGGAGAGGTTGCTGCAATTGCAGTATCTCCTGATTGTAGAGGCCAAGGACAGGGAGACAAATTACTTGATTATATAGAGAAGAAGGCATCATCTATAGGATTTGAAATGCTTTTCTTGCTCACAACTCGGACAGCAGATTGGTTTGTAAGGCGTGGATTTTCAGAATGTTCAATTGATTATATACCTGAGAAGAAAAGGAAAACGATTAATCTATCCCGCAAGTCCAAGTATTACATGAAGAAGCTTCTACCTAATAAGAGTGGAATAACTGTTAGTAGCAGATTTACATCCTCTTAG 1806 0.4352 MAALSSSCSTSLPKISSHRFNFYPHHLNLPPWPPKSMPNNPLSLSTTCKRRNVFSEEFNGSVAEEESFSSMDDKQFVRWFRETWPYLWAHRGATFVVIISGEIVTSPLLDPILKDIAFLHHLGIRFVLVPGTHVQIDNLLRERGRQPKYVGPYRITDDESLAAAMEAAGRIRLMIEAKLSPGPSIYNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGIDFGSTGEVKKVDISRMRERLDGNCIVILSNLGYSSSGEVLNCNAYEVATACALAVRADKLICITDGPILDESGHLIRFLPLQEADMLIRKQVEESETAANYVKAVAEESFKSLKNFNGAVHSPRNGKPFSEYHNSTFHNGVGFDNGNGLSGKHGFAIGGQESLSRTNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDFSGIKQLIQPLEESGILVKRTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASSIGFEMLFLLTTRTADWFVRRGFSECSIDYIPEKKRKTINLSRKSKYYMKKLLPNKSGITVSSRFTSS* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1350 601 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 442 589 IPR016181 -
Gso17g1350 601 Pfam Acetyltransferase (GNAT) family 478 544 IPR000182 GO:0016407
Gso17g1350 601 Pfam Amino acid kinase family 94 310 IPR001048 -
Gso17g1350 601 CDD AAK_NAGS-ABP 75 433 IPR033719 -
Gso17g1350 601 Hamap Amino-acid acetyltransferase [argA]. 69 585 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gso17g1350 601 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 439 587 IPR000182 GO:0016407
Gso17g1350 601 SUPERFAMILY Carbamate kinase-like 72 435 IPR036393 -
Gso17g1350 601 PANTHER AMINO-ACID ACETYLTRANSFERASE 45 592 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gso17g1350 601 Gene3D - 74 438 IPR036393 -
Gso17g1350 601 CDD NAT_SF 480 542 - -
Gso17g1350 601 Gene3D - 439 585 - -
Gso17g1350 601 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 394 585 IPR010167 GO:0004042|GO:0005737|GO:0006526
Gso17g1350 601 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 76 327 IPR010167 GO:0004042|GO:0005737|GO:0006526
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1350 Gso-Chr17 13881100 13888857 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso17g1350 AA_kinase 1.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1350 K14682 - gmx:100800925 1186.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1674 1 53394599 53401874 Gso17g1350 17 13881100 13888857 PCT
Gso17g1350 17 13881100 13888857 Gso1g1674 1 53394599 53401874 PCT