Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1346 ATGTCTTTGGACTCCTCATCAAACCACCCAATTATTCCTGACTTGTATTGCAGTGAAGTAACAAGCGAAGTGATTCACTTGGATTCCGATGATGAGGCTATGAAGTTGAATGTTCTATGGGGAGACTCTGATCATGATGATAGTGATGAAAGCATTCTATTGAGCTTGTTAGAATCCGAACACGACCAAGTGCAGGAACAAACAAAGTCCCTAGGACAACAACTTCGCAAAAAAACATGGCTGATTAATGCTCGAGAAGAGGCCATAAATTGGATCCTAAAGGTGCATGCTTACTACAGTTTCAAACCCGAGACAGCATATCTTTCTGTAGATTACTTCAATCGTTTTCTCTTGTCACACACCTTGACGCCAGATAAAGCATGGCCTCTGCAGCTGTTATCAGTGGCTTGTCTTGCTCTAGCAGCAAAAATGGAAGAAAGAAAAGTGCCACTTCTTTTGGACCTGCAAGTGATCGAGTCAAGGTTCTTGTTTAAGCCCAAAACAGTTCAGAGGATGGAGCTTTTGGTTATGGCCAGTCTCAAGTGGCGATTGCGCACTATAACCCCTTTTGATTTTGTTCACCTTTTCATTGCCAAGCTTCCGTGCTCTGCTTCCACATGGAGAGATTTAAGTTACATTGTTTCTCGTGTCTCCGATGTTATCATCAGAACATGTCTAGTCATGGATTTCTTGGAGTTTTCACCATCCACAATAGCAGCAGCTGCACTGTTATGGGTAACAAATCAATGTGCAGATGAGAAGAAATCAGAGTGCTTCCACAAGAATATAGGCATTGAGATGGTGCAGAAATGTTACAAACTAATGAAGCAGAAACTGATAATTCGTCGATCAGGACTATATTGGCCAAAGACTTTACAATTATTGCCCCGAAGTCCCACTTGTGTCCTTGATCATGCAGCAGCTATGCAAGAAAGCAGCGATGCCCATCACAAGCTCTGA 960 0.425 MSLDSSSNHPIIPDLYCSEVTSEVIHLDSDDEAMKLNVLWGDSDHDDSDESILLSLLESEHDQVQEQTKSLGQQLRKKTWLINAREEAINWILKVHAYYSFKPETAYLSVDYFNRFLLSHTLTPDKAWPLQLLSVACLALAAKMEERKVPLLLDLQVIESRFLFKPKTVQRMELLVMASLKWRLRTITPFDFVHLFIAKLPCSASTWRDLSYIVSRVSDVIIRTCLVMDFLEFSPSTIAAAALLWVTNQCADEKKSECFHKNIGIEMVQKCYKLMKQKLIIRRSGLYWPKTLQLLPRSPTCVLDHAAAMQESSDAHHKL* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1346 319 PANTHER CYCLINS 5 310 IPR039361 -
Gso17g1346 319 SUPERFAMILY Cyclin-like 49 184 IPR036915 -
Gso17g1346 319 Gene3D - 66 185 - -
Gso17g1346 319 SMART cyclin_7 90 178 IPR013763 -
Gso17g1346 319 Pfam Cyclin, N-terminal domain 55 184 IPR006671 -
Gso17g1346 319 Coils Coil 54 74 - -
Gso17g1346 319 SMART Cyclin_C_2 187 312 IPR004367 -
Gso17g1346 319 Pfam Cyclin, C-terminal domain 187 279 IPR004367 -
Gso17g1346 319 CDD CYCLIN 85 177 IPR013763 -
Gso17g1346 319 Gene3D - 56 272 - -
Gso17g1346 319 SUPERFAMILY Cyclin-like 169 284 IPR036915 -
Gso17g1346 319 PANTHER CYCLIN-D1-1-LIKE ISOFORM X1 5 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1346 Gso-Chr17 13820318 13822086 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1346 14 295 Core Cell Cycle Gene Families AT1G70210 38.176 1.23e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1346 K18810 - gmx:100799323 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0925 5 30254247 30256140 Gso17g1346 17 13820318 13822086 GST