Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1337 ATGCTTTCTCTCCCTCCCTCCGACCCCTTCTCCACCTTCTCCGCCGGCTTCACGCCGTGGGACCACGATGAGGATTCCCACGCCCTCTTCTCCCCCAAACCCGTCTCTTCCAGCTCCGGCTCTGACGACAAATCCGAACCGAACCAACATGTATCCGCCTCCTCCACGGCGATGGAGGAGCGGAAACGGCGCCGCATGATATCGAACCGGGAATCGGCCCGCAGGTCCAGGATGCGGAAACAGAGACACCTGGAGAACCTTCGGAACCAGTTGAACAAGTGCAGGGTCGAAAACCGGGAACTGAGTAACCGGTTGCAGTTCGTCCTGCACCACTTGAACCGCCTCCGAACCGAAAACGAATGGTTACACTCCGAGCGAACCTTGCTCCGCCAAAAAGTCGCCAACTTAACACAAATTTTGATTTTCCAACAATTCCAAACTTTCTCCCCTGCATGGACATGCACCAACAACAACACCTCGCTCATGACAATTAATCAAGTTAATTAA 507 0.5424 MLSLPPSDPFSTFSAGFTPWDHDEDSHALFSPKPVSSSSGSDDKSEPNQHVSASSTAMEERKRRRMISNRESARRSRMRKQRHLENLRNQLNKCRVENRELSNRLQFVLHHLNRLRTENEWLHSERTLLRQKVANLTQILIFQQFQTFSPAWTCTNNNTSLMTINQVN* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1337 168 Coils Coil 70 118 - -
Gso17g1337 168 CDD bZIP_plant_GBF1 62 113 IPR045314 GO:0003700|GO:0006355
Gso17g1337 168 PANTHER BZIP TRANSCRIPTION FACTOR 26 155 - -
Gso17g1337 168 SMART brlzneu 57 121 IPR004827 GO:0003700|GO:0006355
Gso17g1337 168 MobiDBLite consensus disorder prediction 31 55 - -
Gso17g1337 168 Pfam bZIP transcription factor 60 119 IPR004827 GO:0003700|GO:0006355
Gso17g1337 168 Gene3D - 59 112 - -
Gso17g1337 168 MobiDBLite consensus disorder prediction 56 74 - -
Gso17g1337 168 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 64 79 IPR004827 GO:0003700|GO:0006355
Gso17g1337 168 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 155 - -
Gso17g1337 168 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 59 122 IPR004827 GO:0003700|GO:0006355
Gso17g1337 168 MobiDBLite consensus disorder prediction 24 81 - -
Gso17g1337 168 SUPERFAMILY Leucine zipper domain 61 112 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1337 Gso-Chr17 13649383 13650219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1337 13 144 bZIP Transcription Factor Family AT3G49760 42.857 8.59e-29 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso17g1337 bZIP_1 2.2e-06 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1337 - - gmx:100809244 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0934 5 30590434 30591370 Gso17g1337 17 13649383 13650219 GST
Gso1g1684 1 53489441 53490277 Gso17g1337 17 13649383 13650219 PCT
Gso11g0395 11 3466020 3466703 Gso17g1337 17 13649383 13650219 PCT
Gso17g1337 17 13649383 13650219 Gso1g1684 1 53489441 53490277 PCT
Gso17g1337 17 13649383 13650219 Gso11g0395 11 3466020 3466703 PCT