Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1336 ATGTTTGACATGAAGTATCCATCCTTCGCCAATGTCACTTTCCGTCAACCTTCTTTCACTCCCACCGGTGCCACTGTCGCCACAGTCACTTTCCATGACCGCCTCAATATCCTCTCCATGTCCGCCACCTTCCTCCACCATGATTCTCTGGCGGTGATCCTGAACGCATTCGCCTTGTACCTTTCTAGACCGCAGAGGCAGATTGTCGACAGACTCATCGTCGGGAGGCTCCTCGTCGTTGGCATGGTGTTTGTGATTGTAGCGTCGGTCAACAACCCGTCGTATCACCGGCTTTCGTCAGAGGAGGACGTGCAGAACAACTCCGATAGCGGTAGAGACGCGTAG 345 0.5391 MFDMKYPSFANVTFRQPSFTPTGATVATVTFHDRLNILSMSATFLHHDSLAVILNAFALYLSRPQRQIVDRLIVGRLLVVGMVFVIVASVNNPSYHRLSSEEDVQNNSDSGRDA* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1336 114 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 9 109 IPR014476 GO:0003680
Gso17g1336 114 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED 9 109 - -
Gso17g1336 114 SUPERFAMILY AF0104/ALDC/Ptd012-like 9 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1336 Gso-Chr17 13610759 13616160 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1336 8 112 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 44.954 1.24e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1336 - - gsj:114391459 225.713