Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g1314 | ATGTGGAATCCTAGGGACCATGAAGATCAAGATGAGTCCTGGGAGGTCAGAGCCTTCGCAGAAGACACAAGTAACATGATGGGCACCACCTGGCCTCCTAGATTCTACTACTGCAGCTTCTGTAGAAGGGAGTTCCGTTCAGCACAAGCCCTTGGCGGCCACATGAACGTTCACCGCCGCGACCGCGCTCGCCTCCACCAAGCTTCAGTAGTACCCCACAACAACAACAATAGCAATAATAGCAACATCAACCCCATCTCCTCTTTTTCTAACACACCCTCTTTTCTCAACATCTCTCATCATCATCAGGACCCTTTTGTTGCAAATGGGGGCTTGTGCCGATTGTACCCCTTTCCAAGCCCTAATAACAACAACAATGATCCATTTTCCTCTCTTGCCCACAACAATAATGCATGCGGTGACTTACCTTCCACTGTTTTTTCAGTTTCTTCTTCTCATTCCCAATATTCATCCCTTCAGTACCCTCCAATGAGGGTGCCTAGTTGCTCAGCTACTTCCTTTGATTTCTCGGTGGCTCAACCTGCTGCTGCTTCAGGGAGGAATAATGTTTTCTCTTCTTCTTATTCTGGGAAAGTGGAACAAGAACCCATAATCTCCTCTTCCACACATCATGGCCTCCACCATGCGGAGCTTGAGCTCCGCTTGGGAAATAAATCAACATCAACCTGA | 690 | 0.4783 | MWNPRDHEDQDESWEVRAFAEDTSNMMGTTWPPRFYYCSFCRREFRSAQALGGHMNVHRRDRARLHQASVVPHNNNNSNNSNINPISSFSNTPSFLNISHHHQDPFVANGGLCRLYPFPSPNNNNNDPFSSLAHNNNACGDLPSTVFSVSSSHSQYSSLQYPPMRVPSCSATSFDFSVAQPAAASGRNNVFSSSYSGKVEQEPIISSSTHHGLHHAELELRLGNKSTST* | 230 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g1314 | 229 | PANTHER | OS07G0101800 PROTEIN | 6 | 225 | - | - | |
Gso17g1314 | 229 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 36 | 63 | IPR013087 | - | |
Gso17g1314 | 229 | PANTHER | OS07G0101800 PROTEIN | 6 | 225 | - | - | |
Gso17g1314 | 229 | Gene3D | Classic Zinc Finger | 23 | 87 | - | - | |
Gso17g1314 | 229 | Pfam | C2H2-type zinc finger | 36 | 60 | - | - | |
Gso17g1314 | 229 | SUPERFAMILY | beta-beta-alpha zinc fingers | 33 | 63 | IPR036236 | - | |
Gso17g1314 | 229 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 38 | 58 | IPR013087 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g1314 | Gso-Chr17 | 13168772 | 13170557 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g1314 | 1 | 71 | C2H2 Transcription Factor Family | AT4G17810 | 71.429 | 1.87e-32 | 114 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Gso17g1314 | zf-C2H2_6 | 1.9e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g1314 | - | - | gmx:102660795 | 412.149 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso5g0958 | 5 | 31502789 | 31504033 | Gso17g1314 | 17 | 13168772 | 13170557 | GST | |
Gso1g1704 | 1 | 53772051 | 53773441 | Gso17g1314 | 17 | 13168772 | 13170557 | PCT | |
Gso11g0372 | 11 | 3207316 | 3209090 | Gso17g1314 | 17 | 13168772 | 13170557 | PCT | |
Gso17g1314 | 17 | 13168772 | 13170557 | Gso1g1704 | 1 | 53772051 | 53773441 | PCT | |
Gso17g1314 | 17 | 13168772 | 13170557 | Gso11g0372 | 11 | 3207316 | 3209090 | PCT |