Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1297 ATGGGAAGTGGAGTTTCAACCCTCTGTTGGTGCTCTCGGATCAACGAACCCGACGTTATTTTCACCGCCACCGACCCATTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATCCTCCGCGCGCTTCCTTTCTCCCACTCGCTTTCTCAGTCCTTCCACTTCCCTCCGTTTCTCTCCGACTCACGAGCCCCGAACCCGACCCGAATTCCACGAAACCGGTTTTAAGGCCATTTCCGGAGCCTCCGTTAGCGCCAACAGCTCCCTTCCGGCAACAGTCATTCGCTTAGATGAAGAAGTGAATGGAGTTTCCTCCAGGGGTAATATCATAAATGGCTTCGAGAGCACGGCGTCGTTTTCCGCCCTCCCGCTCCAGCCCGTTCCCCGAGGCGGCGAGCCTTTCGAGGTCAGCGGCTTCTTCCTCTCTGGTCCTATTGAATCCAACGCCGTCTCCGGTCCTCTCCCCGCCGCCGCCGACTTCGTCGGCGGCGGCGAGATTCCTTTCTCGGCGCCTCTGGCCGGACTTTACGGTAAGAAGAACAGGAAGAAGAAGATGATTTCGGGGTTCCGGAAGGCGTTCAACCGGAACGCGCCGGAGAAGAAGCGGCCGTGGGTGGTGCCGGTGCTGAACTTCGCCGGAAGAAAAGAAAGCGAGGGGAAGCCGCCGCCGCTGCCGGAAGAAAAGAGCAATGTTCAGTGGGCGTTGGGGAAGGCCGGTGAGGATCGAGTCCACGTGGTGGTGTCGGAGGAGCAGGGATGGTTGTTCGTCGGGATTTACGACGGTTTCAACGGCGGCGACGCGCCGGAGTTTCTGATGGGGAACCTCTACCGCGCCGTTCATAACGAGCTTCAGGGTTTGTTTTGGGAACTCGAAGAAGAACAACAAGAACAAGAACAACAACAACCGTTACCGCAAGAGAGCAATCCCGTGGTGGAAGGAACGGAGAGTAAACGGCGTAAGCTGTGGGAGCTTCTTGCCGAGGACGGACTCGACCTTTCCGGTTCGGATAGGTTCGCATTTTCCGTCGACGATGCGCTGAGTGTTAACAATGCCAATGCTGGTAGTGCTGTGAGTAGAAGGTGGTTGTTGCTATCGAAGCTGAAGCACGGGTTGAGGAAGCAGAAGGAGGGTGGAGGGAGAGGGTGGAATCTGGGGAATGAAGAGAAAGAGAAGGAGAAGGAGAATCAAGAGAAGCATTGTGGGAGGAAGAGAAGAGTGGGACCAGTAGATCATGGACTGGTTTTGAGTGCCTTGTCTCGGGCGCTTGAGTTCACTGAGCTTGCTTATTTGGACATGACAGATAAGCTTCTGGACACGAATCCGGAGCTTGCTTTGATGGGTTCGTGTTTGTTGGTTGCTTTGATGAGGGATGAGGATGTGTATCTGATGAATGTTGGAGATAGTCGGGCTATTGTTGCACACTATGAACAGAAAGAGGTTGATTCATGTGTTGAATTGGGAAGCAAGGGAGGTGTTGAGTCCGGAGGTGCCGAGAGCATAGTTGAGGAGCCCCTGGGTTTGGGTCAAATTGGGAGTGCTCAGCAACAGAGGTTGGTGGCATTGCAGCTGTCAACTGATCACAGCACCAACATTGAAGAAGAAGTCATCAGGATTAAAAACGAGCATCCTGATGATGCCCAGTGTATACTCAATGATAGAGTTAAAGGTCGCCTTAAGGTCACCAGAGCATTTGGGGCTGGATTTTTGAAACAGCCGAAGTGGAATGATGCAGTACTAGAGATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCTCTCCTTCACTACGTCACCATAGATTATGCCAGAGAGATCAGTTCCTGATCCTCTCATCTGATGGTTTATATCAATATCTAAGCAATGAAGAAGTGGTTTCTCATGTTGAGAGCTTCATGGAAAAATTTCCAGAAGGGGATCCAGCCCAACATTTAATAGAAGAGCTGCTCCTCCATGCAGCTAAGAAGGCTGGAATGGATTTTCATGAATTGCTAGATATCCCACAAGGAGATCGGAGGAAGTATCACGATGATGTTACTGTCATGGTGATATCACTTGAAGGGAGAATCTGGAAATCATCAGGGAAGTATCCATGA 2106 0.5166 MGSGVSTLCWCSRINEPDVIFTATDPLDETLGHSFCYVRSSARFLSPTRFLSPSTSLRFSPTHEPRTRPEFHETGFKAISGASVSANSSLPATVIRLDEEVNGVSSRGNIINGFESTASFSALPLQPVPRGGEPFEVSGFFLSGPIESNAVSGPLPAAADFVGGGEIPFSAPLAGLYGKKNRKKKMISGFRKAFNRNAPEKKRPWVVPVLNFAGRKESEGKPPPLPEEKSNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGGDAPEFLMGNLYRAVHNELQGLFWELEEEQQEQEQQQPLPQESNPVVEGTESKRRKLWELLAEDGLDLSGSDRFAFSVDDALSVNNANAGSAVSRRWLLLSKLKHGLRKQKEGGGRGWNLGNEEKEKEKENQEKHCGRKRRVGPVDHGLVLSALSRALEFTELAYLDMTDKLLDTNPELALMGSCLLVALMRDEDVYLMNVGDSRAIVAHYEQKEVDSCVELGSKGGVESGGAESIVEEPLGLGQIGSAQQQRLVALQLSTDHSTNIEEEVIRIKNEHPDDAQCILNDRVKGRLKVTRAFGAGFLKQPKWNDAVLEMFRNEYIGTAPYISCSPSLRHHRLCQRDQFLILSSDGLYQYLSNEEVVSHVESFMEKFPEGDPAQHLIEELLLHAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1297 701 MobiDBLite consensus disorder prediction 298 312 - -
Gso17g1297 701 Gene3D - 225 696 IPR036457 -
Gso17g1297 701 Pfam Protein phosphatase 2C 428 660 IPR001932 -
Gso17g1297 701 PANTHER PROTEIN PHOSPHATASE 2C 29 373 699 - -
Gso17g1297 701 PANTHER PROTEIN PHOSPHATASE 2C 29 14 296 - -
Gso17g1297 701 Coils Coil 281 301 - -
Gso17g1297 701 PANTHER PROTEIN PHOSPHATASE 2C 14 296 IPR015655 GO:0004722|GO:0006470
Gso17g1297 701 PANTHER PROTEIN PHOSPHATASE 2C 373 699 IPR015655 GO:0004722|GO:0006470
Gso17g1297 701 SMART PP2C_4 225 687 IPR001932 -
Gso17g1297 701 SUPERFAMILY PP2C-like 238 690 IPR036457 -
Gso17g1297 701 CDD PP2Cc 411 689 IPR001932 -
Gso17g1297 701 MobiDBLite consensus disorder prediction 375 402 - -
Gso17g1297 701 ProSiteProfiles PPM-type phosphatase domain profile. 226 689 IPR001932 -
Gso17g1297 701 MobiDBLite consensus disorder prediction 294 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1297 Gso-Chr17 12904051 12908997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1297 1 700 PP2C-type Phosphatase Gene Family AT2G35350 55.168 0.0 733
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1297 - - gmx:100779143 1352.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0972 5 31944469 31949877 Gso17g1297 17 12904051 12908997 GST
Gso1g1711 1 53858828 53864151 Gso17g1297 17 12904051 12908997 PCT
Gso11g0363 11 3133155 3138672 Gso17g1297 17 12904051 12908997 PCT
Gso17g1297 17 12904051 12908997 Gso1g1711 1 53858828 53864151 PCT
Gso17g1297 17 12904051 12908997 Gso11g0363 11 3133155 3138672 PCT