Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1295 ATGGGTTGCTTACACTCAAAAACCGCACATCTTCACTCCCCTGAAGACCCTCCTACTGCCTTGCCAGACTCCAAAAAACCCGATCCAGGGAATGGTGGTGATGATGTTGATCAAGAGTGTCAGGTTCAAGCATTCAAAGAGTATGGTCTGATTGAGCTTAGAAGGGCCACAAATGAGTTCAGCACAGATTACATTGTTTCTGAGAGTGGTGAGAAAGCTCCCAATGTGGTCTACAGAGGGAAGCTTGAGAACAATCGGTTAGTTGCTGTGAAACGCTTCTCCAAACTGTCTTGGCCTGATGCTCAACAGTTCATGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAGAGAATGGTGAATCTAATTGGTTGTTGTGCTGAAGGAGATGAAAGGCTCTTGGTTGCTGAGTACATGCCAAATGATACTTTGTCCAAACATCTCTTTCACTGGGACAAGCAACCATTACCATGGGAAATGCGTGTCAGAGTTGCATACCATGTTGCCCAGGCACTAGATCATTGTAGCTTGGAAAACCATAAAATATATCATGATCTGAATGCATATAGGATTCTTTTTGATGAGGATGGTGATCCCCGCTTATCTAGTTTTGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTACAGTACTAATTTAGCTTATACTCCACCTGAATTTTTGCGAACAGGCAGGATAATCCCAGAGAGTGTGATCTACAGTTATGGAACTGTTCTTCTGGATCTTTTAAGTGGCAAGCACATTCCTCCAAGCCATGCTTTGGACCTAATCAGAGGGAAAAATGTTTTGTTGTTGATGGACTCTTCTCTAGAAGGGCAATATGCAAACGACGATGCTACAAAGTTGGTTGAGCTTGCTTCAAAATGTCTTCAGTTTGAGGCCAGAGAACGACCTGAAATTAAGTTCCTTCTTACTGCCGTTGCGCCTCTTCAAAGGCAGAAAGAGGTAGCATCTCTTGTGTTAATGGGCCTAACTAAAAACACCGCAGTGGCAGTGCTACCAACCATGCTTTCTCCTCTTGGAAAGGCTTGTGCTAGGATGGATCTTACTGCTGTGCATGATATATTGTTAAAAACAGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCATTCCAAGAATGGACACAACAAGTACAAGATATCTTGAACACAAAAAAGTTTGGGGATATTGCATTCAGAGACAAGGATTTCAAAAATGCAATCGAGTATTATTCTAAGTTGGTGGTTATGATGTCTGTTCCTTCTGCTACTGTGTTTGCAAGGAGAGCCTTCTCCTACTTGATGAATGATCAAGCAGAACTTGCATTAAGAGATGCCATGCAAGCACAGGTATGCATACCGGATTGGCCAACTGCATTCTACTTGCAGGCTCTTGCCCTCTCAAAGCTGGGAATGGAAACTGATGCACATGACATGCTTAATGATGGAGCTGCCTTTGAAGCAAAGAGGTCTAACAGCTGGCGCGGATAA 1497 0.4335 MGCLHSKTAHLHSPEDPPTALPDSKKPDPGNGGDDVDQECQVQAFKEYGLIELRRATNEFSTDYIVSESGEKAPNVVYRGKLENNRLVAVKRFSKLSWPDAQQFMAEAAGVGKVRHKRMVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSLENHKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIPESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNVLLLMDSSLEGQYANDDATKLVELASKCLQFEARERPEIKFLLTAVAPLQRQKEVASLVLMGLTKNTAVAVLPTMLSPLGKACARMDLTAVHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFSYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAHDMLNDGAAFEAKRSNSWRG* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1295 498 Gene3D Phosphorylase Kinase; domain 1 34 138 - -
Gso17g1295 498 SUPERFAMILY Protein kinase-like (PK-like) 51 313 IPR011009 -
Gso17g1295 498 MobiDBLite consensus disorder prediction 1 37 - -
Gso17g1295 498 ProSiteProfiles Protein kinase domain profile. 63 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1295 498 SUPERFAMILY TPR-like 389 487 IPR011990 GO:0005515
Gso17g1295 498 Pfam Protein tyrosine and serine/threonine kinase 76 311 IPR001245 GO:0004672|GO:0006468
Gso17g1295 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 497 IPR045845 GO:0004672|GO:0009742
Gso17g1295 498 Gene3D Tetratricopeptide repeat domain 388 497 IPR011990 GO:0005515
Gso17g1295 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK2 1 497 - -
Gso17g1295 498 Gene3D Transferase(Phosphotransferase) domain 1 140 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1295 Gso-Chr17 12863999 12870043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1295 14 317 Glycoside Hydrolase AT3G07070 33.232 5.66e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gso17g1295 PK_Tyr_Ser-Thr 9.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1295 K14500 - gmx:100795258 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0615 5 7449418 7455309 Gso17g1295 17 12863999 12870043 GST