Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1269 ATGGCGGCACCCATCCTTCTCGTCATTGCAGATGGCGGAACAGCCATCCCGCCATTACCACTTGCGGGATCCATTGAAAAAACAGGGAAGACTGAGTTTCTGGATGAACTCAACACCATTGCTGGTTTGAGGCACAAGAATTTGGTTCAGCTTCAAGGTTGGTGCGTTGAGAAGGGGGAGTTGCTGCTTGTGTATGACTTCATGCCCAATGGAAGCTTGGACAAGATGCTTTACAAGGAACCTGAAAGGGGGAAGCTTTTGAGTTGGTCTCACAGGCAAAACATTGCACTAGGGTTGGCTTCTGTGCTGGTTTACCTTCACCAAGAGTGTGAGCAGAGAGTGATTCACAGGGATATTAAGGCTGGGAACATATTGCTGGATGGAAATTTCAACCCTAGGTTAGGGGATTTTGGACTGGCAAAGCTTATGGATCATGATAAGGGCCCTGTTTCCACTTTAACTGCTGGAACAATGGGGTACCTTGCACCTGAGTATCTTCAGTATGGAAAAGCCACTGATAAGACTGATGTTTTCAGCTATGGGGTGGTTGTGCTTGAGGTGGCTTGTGGGAGGAGGCCAATTGAAAGAGAAGGGTATAAGATGTTGAATCTGATTGATTGGGTTTGGGGCCTTCACTCTGAAGGAAAAGTGATTGAGGCAGCTGATAAAAGGTTGAATGGGGAGTTTGAGGAGGAGAAGATGAGGAAATTGTTGATTTTGGGGTTGAGTTGTGCTAATCCTGATAGTGCTGAGAGACCCTCCATGAGGAGAGTGCTGCAAATTCTAAACAATGAGGCTGCACCACTTGCTGTGCCAAAAGTGAAGCCAACACTCACCTTTTCTTCTGACCTACCTCTGCCTCTCACTATTGAGGACATTGTTTCAGAGGCGGATCAAGAGTCTATGTGCAAGATCAAAATTGACTGA 927 0.466 MAAPILLVIADGGTAIPPLPLAGSIEKTGKTEFLDELNTIAGLRHKNLVQLQGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGKLLSWSHRQNIALGLASVLVYLHQECEQRVIHRDIKAGNILLDGNFNPRLGDFGLAKLMDHDKGPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSYGVVVLEVACGRRPIEREGYKMLNLIDWVWGLHSEGKVIEAADKRLNGEFEEEKMRKLLILGLSCANPDSAERPSMRRVLQILNNEAAPLAVPKVKPTLTFSSDLPLPLTIEDIVSEADQESMCKIKID* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1269 308 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 25 282 - -
Gso17g1269 308 Pfam Protein kinase domain 27 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1269 308 Gene3D Transferase(Phosphotransferase) domain 1 69 281 - -
Gso17g1269 308 Gene3D Phosphorylase Kinase; domain 1 21 68 - -
Gso17g1269 308 PANTHER - 25 282 - -
Gso17g1269 308 SMART serkin_6 3 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1269 308 ProSiteProfiles Protein kinase domain profile. 1 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso17g1269 308 ProSitePatterns Serine/Threonine protein kinases active-site signature. 114 126 IPR008271 GO:0004672|GO:0006468
Gso17g1269 308 SUPERFAMILY Protein kinase-like (PK-like) 30 285 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1269 Gso-Chr17 12450511 12454066 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1269 29 299 Receptor kinase-like Gene Family AT5G55830 72.628 2.52e-141 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Gso17g1269 Pkinase 9.3e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1269 - - gmx:112997654 619.387