Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1229 ATGACGTTGTTGAAGTTCCATGAAGTGTGGAAGCCAGTTTTGGTGATGATTATAGTTAATTTAGCTCTGGCTTTGGTCAATATATTTCTGAAGAAGATTGTTAATGAAGGAGTGGACTACTTAACCATCCTAACATATCGACAAGCAATTTCAGCCATTTTCTTGACACCTATATATTGCTTTATTTTCAGGAACTCAAAAGTGACACCCTACTTGTTTTGTTTCATTTTCAGGGTAACACTCACTCAATCCCTGTACCTTATTGGACTAGAATATACATCTGCCACGTTCGCATGTGCATTCCTAAATATGGTGCCTGTATTCACCTTTATTATGGCGCTGCCACTGGGGATAGAGAAAGTGGACATGAAAAAGCTGAGTGCGAAGGCCAAGGTGTTGGGAACTTTTGTGTGTATTGGTGGAGCTTTGATGTTGATCCTTTATAAAGGAGTGCCCTTAATCAACCAACAACCAGAGCACATAGCAGACAAAGGCACAATAAGATCATCAGCCTCCAAGTTAAAGAAATGGATCATAGGTTCACTGCTTCTAACTGCAGGATGCTTCTTGTGGTCTTCACGGTTTCTTATACAAGCAAGCATTAGCAAAAAGTATCCATGTCAATACTCTAGCACTGCCATTTTGTCCTTTTTTGCTTCCATTCAATCAGCAATATTGACTTTGGTCATCGATAGAAGTAATGCCAAATGGATTCTCAAAGGAAAGTTAGAGATAATGACTGTTGTATATGCTGGGCTGGTAGGGTCGGGCTTGTGCTATGTGGCAATGTCATGGTGTGTGAAACAAAGGGGTCCAGTTTTTACTTCAGCATTTACCCCTCTTCTACAGATGTTCGTTGCTGTGCTTGATTTCTCTATATTACATGAGGAAATTTATCTTGGCAGTGTTGCAGGATCAGTCTTGGTTATATCTGGCACGTATATTCTACTTTGGGTTAAAAGTAAAGAGGAAGACCAATGTGCCATGAAGGGTACTCAAGAAAGTCAAGAAGATGAATGTAAGAATAATTTGGAGGCCAGTCCAAATGTACCTTCTAAGCTAAGGCCTAATGAGGAACAAGGATTCTCTGAATTACAAGTGAAGTAG 1107 0.3993 MTLLKFHEVWKPVLVMIIVNLALALVNIFLKKIVNEGVDYLTILTYRQAISAIFLTPIYCFIFRNSKVTPYLFCFIFRVTLTQSLYLIGLEYTSATFACAFLNMVPVFTFIMALPLGIEKVDMKKLSAKAKVLGTFVCIGGALMLILYKGVPLINQQPEHIADKGTIRSSASKLKKWIIGSLLLTAGCFLWSSRFLIQASISKKYPCQYSSTAILSFFASIQSAILTLVIDRSNAKWILKGKLEIMTVVYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLLQMFVAVLDFSILHEEIYLGSVAGSVLVISGTYILLWVKSKEEDQCAMKGTQESQEDECKNNLEASPNVPSKLRPNEEQGFSELQVK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1229 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 149 - -
Gso17g1229 368 PANTHER WAT1-RELATED PROTEIN 10 341 IPR030184 GO:0016021|GO:0022857
Gso17g1229 368 MobiDBLite consensus disorder prediction 342 356 - -
Gso17g1229 368 PANTHER WAT1-RELATED PROTEIN 10 341 - -
Gso17g1229 368 MobiDBLite consensus disorder prediction 328 368 - -
Gso17g1229 368 SUPERFAMILY Multidrug resistance efflux transporter EmrE 242 322 - -
Gso17g1229 368 Pfam EamA-like transporter family 179 317 IPR000620 GO:0016020|GO:0016021
Gso17g1229 368 Pfam EamA-like transporter family 11 146 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1229 Gso-Chr17 11974136 11977587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1229 1 325 Nodulin-like Gene Family AT1G11460 38.138 2.49e-72 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1229 - - gmx:106796630 724.931