Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1172 ATGGCGAGTGCATGGGTGAAGTCATGGCAGTGCAAGTCAAGAGCTTTCGAAGACGTTTACCATCCACACCCCAAAATCCTGAGTGCAGGTTGCAGAAAGAGCGTGGAGAGCATCAAAGAACTGGTGGATATACCCAAGCCCAAGCCGAGGCCCAGAAAGCCCAAGCCCAAGCCCAAGCCACCTTTGGAGAAACATCCAAGCTCGAAATACCCATCATCAACAACCAAACCTGAATTCGAAGCACGAACCACCATGACACGTTCTCGAAGCAGCACTACGACAACGACAACCTCGTCGCGTGGCATCATTGAACTACCCGAAGGCCACCCTTCGCGCAACGTTGTCGAAATCATCTTCCACACAAGCTGGGGCCCCAAGCCCTTCCCGGGTCGGGTCGAACTGATTTTCAAGGTGCAGAACGCGCCGCGCACCGTGGCGCGGTTCGAGGAGTTTCGCGAGGCGGTGAAGGCACGCGCCGCGGCGGGGCTCGCCGAGGGCAACGACGGCGAGGAGAACGCGCGGTGCATCGCCGACGGGAACGAGGTCATGCGGTTTCATTGCTTGGGTTTTGCCGAGGACGGTGTACCCTACGACGGTGGTGGCTGTGCATGGTCATTTCCGGAGAAGAAGGGGGCGGCGATTTGTACTTTCTCCGGAAGCGGCGGCGCGCATGAGACAGCCGGCGGAGGAAAGGGGAGAAGGGCCATGCTGGTTTGTCGGGTCGTGGCGGGTCGGGTCTCGAAGCAACTCGGGTTTCTTGACTCGTTGTTGGACAAGCGAGTCGGGTTCGACTCGGTGAGTGGGGATAACGGCGCGTTGTTAGTGTTTGACTCGCGTGCGGTATTGCCCTGCTTTCTTATTATTTACAGGTTGTAA 876 0.5788 MASAWVKSWQCKSRAFEDVYHPHPKILSAGCRKSVESIKELVDIPKPKPRPRKPKPKPKPPLEKHPSSKYPSSTTKPEFEARTTMTRSRSSTTTTTTSSRGIIELPEGHPSRNVVEIIFHTSWGPKPFPGRVELIFKVQNAPRTVARFEEFREAVKARAAAGLAEGNDGEENARCIADGNEVMRFHCLGFAEDGVPYDGGGCAWSFPEKKGAAICTFSGSGGAHETAGGGKGRRAMLVCRVVAGRVSKQLGFLDSLLDKRVGFDSVSGDNGALLVFDSRAVLPCFLIIYRL* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1172 291 MobiDBLite consensus disorder prediction 40 106 - -
Gso17g1172 291 SUPERFAMILY ADP-ribosylation 102 290 - -
Gso17g1172 291 Gene3D - 100 290 - -
Gso17g1172 291 PANTHER POLY(ADP-RIBOSE) POLYMERASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 2 290 - -
Gso17g1172 291 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 290 - -
Gso17g1172 291 MobiDBLite consensus disorder prediction 67 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1172 Gso-Chr17 11274502 11275896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1172 98 290 C2H2 Transcription Factor Family AT5G54630 33.480 1.23e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1172 - - gmx:100792099 514.227