Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1171 ATGTCGACTTACAGAGACGAGGATCCCCGTCTTCATGACATCAAAACTAAGATTCGTGTTGTCCCTAATTTCCCCAAACCTGGTATTATGTTCCAAGACATTACTACTCTGTTGCTCGACCCCAAAGCCTTTAAAGACACGATAGATTTGTTCGTTGAGCGATACAAAGGCAAAAACATTTCTGTTGTTGCAGGAATTGAAGCTCGGGGTTTCATTTTTGGTTCTCCCATTGCTCTGGCAATAGGAGCAAAGTTTGTACCATTGAGGAAACCAAAAAAATTGCCTGGTGTGTTTTTTATTCTTAATTTTTCCTCTAGTAACTATGTTGTCTACTTTCTCTCATTTTCTGTTAACAAAAGATTGTTTTGGTACGTGGCAGGCAAAGTTATTTCTCAAGAGTATATTCTGGAATATGGAAGAGACTGTCTTGAGATTCATGTTGGAGCCGTTGAACCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCCACTGGTGGAACTCTCTGTGCAGCCATGGACTTACTAGAGCGAGTGGGAGCAGAGGTAGTGGAGTGCGGATGTGTAATTGAATTGCCAGAATTAAAAGGCCGTGAACGGTTGAACGGGAAGGCCTTGTATGTGTTAGTGGAATGTTTTGAGTGCTGTCAGTAG 654 0.4205 MSTYRDEDPRLHDIKTKIRVVPNFPKPGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGSPIALAIGAKFVPLRKPKKLPGVFFILNFSSSNYVVYFLSFSVNKRLFWYVAGKVISQEYILEYGRDCLEIHVGAVEPGERALVVDDLIATGGTLCAAMDLLERVGAEVVECGCVIELPELKGRERLNGKALYVLVECFECCQ* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1171 217 CDD PRTases_typeI 48 211 IPR000836 -
Gso17g1171 217 SUPERFAMILY PRTase-like 13 207 IPR029057 -
Gso17g1171 217 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 124 211 - -
Gso17g1171 217 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 6 98 - -
Gso17g1171 217 Gene3D - 2 212 IPR029057 -
Gso17g1171 217 Hamap Adenine phosphoribosyltransferase [apt]. 14 212 IPR005764 GO:0003999|GO:0005737|GO:0006168
Gso17g1171 217 Pfam Phosphoribosyl transferase domain 50 198 IPR000836 -
Gso17g1171 217 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 124 211 - -
Gso17g1171 217 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 6 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1171 Gso-Chr17 11263913 11270067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1171 1 212 PRT Gene Family AT1G27450 63.208 7.16e-91 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1171 K00759 - gmx:100791569 358.992