Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1164 ATGAGAAAGTCAGACAAAAACCCCATGTGTGTGATCTTCAAATTGGTGCGGTGTTTTGGACAAGGAACAAATGGGTATGTACAATTGGGCCATAGCCCAATAGGGCTATTACCAAAGGGTCATTTGGCAGTGTATGTGGGTGAATCTGAAGATGAGAAGCAACGTGTATTGGTACCGGTTACTTACTTTAATCACCCTCTTCTTGGGAAGCTATTGGAGGATGCTGAGAAAGTTTATGGATTTGATCATCCGGGTGTAATAACCATACCATGCAGAGTCTCTGAGTTTGAGAGAGTTCAGAAGATTATTGCCACCACTAGAGGCTACCATAGATGCCTTAGAATTTGTTGCTCCATCAAGTAG 363 0.427 MRKSDKNPMCVIFKLVRCFGQGTNGYVQLGHSPIGLLPKGHLAVYVGESEDEKQRVLVPVTYFNHPLLGKLLEDAEKVYGFDHPGVITIPCRVSEFERVQKIIATTRGYHRCLRICCSIK* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1164 120 PANTHER - 8 120 - -
Gso17g1164 120 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 120 IPR003676 GO:0009733
Gso17g1164 120 Pfam Auxin responsive protein 38 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1164 Gso-Chr17 11138969 11139331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1164 37 103 Calmodulin-binding Proteins AT3G43120 49.254 1.61e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1164 K14488 - gmx:102668727 250.751