Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso17g1161 | ATGGCGGCAGAGTCATCACTGAGGGTGGCGACTCCCACTCTTTGCAACCTCAATGGGTCTCAGAGACGACCAACCACCACCACTCTCTCTCCGCTTCGCTTCATGGGTTTTCGTCCTCGACCCTCCTCTCACTCTCTCACCTCCTCTTCCCTTTCACACTTCTTCGGGAGCACAAGAATTCACTCCAATTCTTCTTCTTCTTATTCTTCCATTTCACGCCAACATGCTCCGAGAAGAAACTTCTCTGTTTTCGCCATGTCTGCTGATGACGCAAAGCGCAGTGTTCCATTGAAGGATTATCGCAACATCGGTATCATGGCTCACATAGATGCTGGAAAGACTACTACAACAGAACGAATTTTGTACTATACTGGAAGGAACTACAAAATTGGAGAGGTGCATGAGGGAACAGCAACCATGGACTGGATGGAACAAGAACAAGAGAGGGGGATTACCATTACTTCTGCTGCAACCACTACATTTTGGAACAAGCACCGGATCAACATTATTGATACCCCTGGTCACGTTGACTTCACCTTAGAAGTGGAGCGTGCTCTTAGGGTGTTGGATGGAGCTATATGCTTGTTTGACAGTGTTGCTGGCGTGGAGCCGCAATCGGAAACTGTGTGGAGGCAGGCTGATAAATATGGAGTCCCGCGAATTTGTTTTGTCAATAAAATGGACCGTCTTGGAGCAAACTTTTATAGAACAAGAGACATGATAGTAACGAATTTGGGTGCTAAACCACTTGTAATTCAGTTACCAATTGGTTCAGAAGATAACTTTAAGGGAGTTATAGACCTTGTTAGGAATAAGGCTATAGTTTGGTCTGGAGAAGAGCTGGGTGCCAAGTTTGATATTGTAGATATTCCAGAAGATCTTCAAGAGCAGGCTCAGGATTACCGTGCCCAGATGATAGAAAACATAGTTGAGTTTGATGACCAGGCTATGGAGAACTACCTGGAAGGAATTGAACCGGATGAGGAAACTATAAAAAAATTAATTAGGAAGGGAACAATATCAGCCAGTTTTGTGCCAGTGATGTGTGGCTCGGCTTTCAAAAACAAGGGAGTCCAACCATTGCTCGATGCAGTAGTGGATTATCTACCATCACCACTTGACTTGCCAGCAATGAAGGGCAGTGACCCTGAAAACCCTGAAGCAACAATAGAGAGACTAGCAAGTGATGATGAACCATTTGCTGGACTAGCTTTTAAGATCATGAGTGATCCATTTGTAGGTTCCCTTACGTTTGTCAGGGTGTATGCTGGAAAGCTAGGTGCTGGGTCTTATGTACTCAATGCAAACAAAGGGAAAAAGGAGAGAATTGGTAGACTTTTAGAAATGCATGCAAACAGCAGAGATGATGTTAAAGTGGCTTTAGCTGGTGATATTATTGCTCTTGCAGGTTTGAAAGATACTATTACAGGTGAAACATTGTGTGACCCTGATAATCCAATCGTGCTCGAGCGGATGGACTTCCCTGATCCTGTTATTAAGGTTGCAATTGAACCGAAAACTAAAGCTGATGTTGACAAGATGGCAACTGGTTTAATCAAACTTGCACAGGAAGACCCTTCTTTCCACTTCTCCCGTGATGAAGAGATAAACCAGACAGTAATTGAAGGAATGGGAGAATTACATCTTGAAATCATTGTTGATCGGCTCAAAAGAGAATTTAAGGTGGAAGCTAACGTTGGTGCCCCCCAAGTAAACTACAGGGAAAGCATTTCCAAAATCTCAGAAGTGAAGTATGTGCACAAGAAACAATCAGGTGGACAGGGTCAGTTTGCAGATATCACTGTCCGGTTTGAACCCATGGACCCAGGTAGTGGATATGAGTTCAAGAGTGAAATCAAAGGAGGTGCTGTACCAAGAGAATACATTCCTGGTGTGATGAAAGGATTGGAAGAGTGTATGAGCAATGGTGTGCTTGCTGGCTTTCCGGTCGTTGATGTACGAGCAGTACTCACAGATGGTTCTTACCATGATGTAGATTCAAGCGTGTTGGCTTTCCAGTTGGCAGCAAGAGGAGCTTTTAGGGAAGGAATAAGAAAAGCTGGACCGAGGATGCTTGAGCCTATAATGAAGGTTGAAGTTGTTACTCCTGAAGAACATCTAGGTGATGTAATTGGGGATCTCAACTCAAGAAGAGGACAGATCAACAGTTTTGGTGACAAACCTGGTGGCCTTAAGGTGGTTGATTCCCTGGTACCTCTTGCTGAGATGTTCCAGTATGTCAGCACACTCAGAGGGATGACAAAGGGCCGTGCATCCTACACAATGCAATTAGCCATGTTTGATGTGGTGCCTCAGCACATTCAGAACCAACTTGCCACCAAAGAGCAAGAAGTTGCCGCTTAA | 2364 | 0.445 | MAAESSLRVATPTLCNLNGSQRRPTTTTLSPLRFMGFRPRPSSHSLTSSSLSHFFGSTRIHSNSSSSYSSISRQHAPRRNFSVFAMSADDAKRSVPLKDYRNIGIMAHIDAGKTTTTERILYYTGRNYKIGEVHEGTATMDWMEQEQERGITITSAATTTFWNKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAGVEPQSETVWRQADKYGVPRICFVNKMDRLGANFYRTRDMIVTNLGAKPLVIQLPIGSEDNFKGVIDLVRNKAIVWSGEELGAKFDIVDIPEDLQEQAQDYRAQMIENIVEFDDQAMENYLEGIEPDEETIKKLIRKGTISASFVPVMCGSAFKNKGVQPLLDAVVDYLPSPLDLPAMKGSDPENPEATIERLASDDEPFAGLAFKIMSDPFVGSLTFVRVYAGKLGAGSYVLNANKGKKERIGRLLEMHANSRDDVKVALAGDIIALAGLKDTITGETLCDPDNPIVLERMDFPDPVIKVAIEPKTKADVDKMATGLIKLAQEDPSFHFSRDEEINQTVIEGMGELHLEIIVDRLKREFKVEANVGAPQVNYRESISKISEVKYVHKKQSGGQGQFADITVRFEPMDPGSGYEFKSEIKGGAVPREYIPGVMKGLEECMSNGVLAGFPVVDVRAVLTDGSYHDVDSSVLAFQLAARGAFREGIRKAGPRMLEPIMKVEVVTPEEHLGDVIGDLNSRRGQINSFGDKPGGLKVVDSLVPLAEMFQYVSTLRGMTKGRASYTMQLAMFDVVPQHIQNQLATKEQEVAA* | 788 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso17g1161 | 787 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 98 | 373 | IPR000795 | GO:0003924|GO:0005525 | |
Gso17g1161 | 787 | CDD | EFG_mtEFG1_IV | 573 | 688 | IPR005517 | GO:0005525 | |
Gso17g1161 | 787 | CDD | EFG_III | 495 | 570 | IPR009022 | - | |
Gso17g1161 | 787 | Gene3D | - | 575 | 778 | IPR014721 | - | |
Gso17g1161 | 787 | Coils | Coil | 778 | 787 | - | - | |
Gso17g1161 | 787 | MobiDBLite | consensus disorder prediction | 14 | 32 | - | - | |
Gso17g1161 | 787 | Pfam | Elongation factor Tu domain 2 | 414 | 481 | IPR004161 | GO:0005525 | |
Gso17g1161 | 787 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 498 | 574 | - | - | |
Gso17g1161 | 787 | SUPERFAMILY | EF-G C-terminal domain-like | 693 | 782 | IPR035647 | - | |
Gso17g1161 | 787 | SMART | EFG_IV_2 | 570 | 688 | IPR005517 | GO:0005525 | |
Gso17g1161 | 787 | SUPERFAMILY | EF-G C-terminal domain-like | 494 | 571 | IPR035647 | - | |
Gso17g1161 | 787 | TIGRFAM | EF-G: translation elongation factor G | 93 | 782 | IPR004540 | GO:0003746|GO:0005525|GO:0006414 | |
Gso17g1161 | 787 | Hamap | Elongation factor G [fusA]. | 96 | 782 | IPR004540 | GO:0003746|GO:0005525|GO:0006414 | |
Gso17g1161 | 787 | Pfam | Elongation Factor G, domain III | 494 | 567 | IPR041095 | - | |
Gso17g1161 | 787 | SUPERFAMILY | Ribosomal protein S5 domain 2-like | 569 | 689 | IPR020568 | - | |
Gso17g1161 | 787 | Gene3D | Translation factors | 382 | 497 | - | - | |
Gso17g1161 | 787 | PRINTS | GTP-binding elongation factor signature | 102 | 115 | IPR000795 | GO:0003924|GO:0005525 | |
Gso17g1161 | 787 | PRINTS | GTP-binding elongation factor signature | 148 | 156 | IPR000795 | GO:0003924|GO:0005525 | |
Gso17g1161 | 787 | PRINTS | GTP-binding elongation factor signature | 168 | 178 | IPR000795 | GO:0003924|GO:0005525 | |
Gso17g1161 | 787 | PRINTS | GTP-binding elongation factor signature | 184 | 195 | IPR000795 | GO:0003924|GO:0005525 | |
Gso17g1161 | 787 | PRINTS | GTP-binding elongation factor signature | 220 | 229 | IPR000795 | GO:0003924|GO:0005525 | |
Gso17g1161 | 787 | CDD | EFG_mtEFG_C | 693 | 771 | IPR035649 | - | |
Gso17g1161 | 787 | PANTHER | RIBOSOME-RELEASING FACTOR 2, MITOCHONDRIAL | 81 | 780 | - | - | |
Gso17g1161 | 787 | Pfam | Elongation factor Tu GTP binding domain | 99 | 371 | IPR000795 | GO:0003924|GO:0005525 | |
Gso17g1161 | 787 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 96 | 371 | IPR027417 | - | |
Gso17g1161 | 787 | Hamap | Elongation factor G, chloroplastic. | 90 | 787 | IPR030848 | GO:0003746|GO:0006414|GO:0009507 | |
Gso17g1161 | 787 | TIGRFAM | small_GTP: small GTP-binding protein domain | 100 | 270 | IPR005225 | GO:0005525 | |
Gso17g1161 | 787 | PANTHER | TRANSLATION ELONGATION FACTOR G-RELATED | 81 | 780 | - | - | |
Gso17g1161 | 787 | Pfam | Elongation factor G, domain IV | 569 | 687 | IPR005517 | GO:0005525 | |
Gso17g1161 | 787 | SUPERFAMILY | Translation proteins | 354 | 494 | IPR009000 | - | |
Gso17g1161 | 787 | CDD | EFG_mtEFG_II | 400 | 482 | - | - | |
Gso17g1161 | 787 | CDD | EF-G | 102 | 372 | - | - | |
Gso17g1161 | 787 | MobiDBLite | consensus disorder prediction | 14 | 34 | - | - | |
Gso17g1161 | 787 | SMART | EFG_C_a | 690 | 778 | IPR000640 | - | |
Gso17g1161 | 787 | Pfam | Elongation factor G C-terminus | 691 | 777 | IPR000640 | - | |
Gso17g1161 | 787 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 141 | 156 | IPR031157 | - | |
Gso17g1161 | 787 | Gene3D | - | 91 | 381 | IPR027417 | - | |
Gso17g1161 | 787 | Gene3D | - | 694 | 765 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso17g1161 | Gso-Chr17 | 11120047 | 11123978 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso17g1161 | 416 | 577 | Eukaryotic Initiation Factors Gene Family | AT3G22980 | 32.022 | 1.73e-11 | 66.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso17g1161 | K02355 | - | gmx:100797377 | 1509.2 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso5g0470 | 5 | 4999914 | 5003818 | Gso17g1161 | 17 | 11120047 | 11123978 | GST |