Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1154 ATGGATCCAATCTCGGCACATGGTCATTCCCTCCCCCCTCCTTTTCACACAAGAGATCTCCATCTGCACCACCAGCAGCAACAACAACAACACCAGTTCCAAAGCTTAAACCAAGCCACCGAGGACGAGAACAGCGGCAGCAGCGGCGCGCAGAAAAGGGAACGCGAAGAAAACAGCAACGGCAACAACGAAGGTGCAGGTGAGGCTGAGATAACAAGAAGGCCTCGAGGAAGACCAGCAGGGTCCAAAAACAAGCCTAAGCCACCCATTATCATCACCCGCGACAGCGCCAACGCCATGAGAACCCACATGATGGAGGTGGCAGACGGCTACGACATCGTGGAAAGCGTGTCTGAGTTCGCCAGGAAACGCCAGAGAGGGATTTGCATCATGAGCGGCACCGGCACCGTCACCAACGTCACCCTCCGGCAACCGGCTTCATCGGGTTCGGTTGTCACTCTTCACGGAAGGTTCGAGATCTTGTCCCTCTCGGGATCGTTCCTTCCACCACCTGCGCCACCGGCCGCGTCTGGTTTGACCATCTATCTGGCCGGTGGTCAGGGACAGGTGGTGGGAGGAAGCGTTGTTGGAACACTGGTTGCTTCAGGGCCCGTGGTGATCATGGCCGCCTCGTTTAGCAACGCTGCTTATGAGAGGCTTCCTTTGGAGGATGAGGACCCTAATTCGCTGCAAATGCAAGGAGGTTCAATTGGGTCACCCGGTGCAAGTGGTGTTGGCCAGTCACAGCTTCTAGGAGGGGATGCTACCGCTCCACTTTTCCATGGTTTGCCTCCTAACCTTCTCAATTCTGTTCAGATGCCATCTGAGCCATTCTGGGCGGCATCTACTCGCCCACCTTTCTGA 864 0.5613 MDPISAHGHSLPPPFHTRDLHLHHQQQQQQHQFQSLNQATEDENSGSSGAQKREREENSNGNNEGAGEAEITRRPRGRPAGSKNKPKPPIIITRDSANAMRTHMMEVADGYDIVESVSEFARKRQRGICIMSGTGTVTNVTLRQPASSGSVVTLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLVASGPVVIMAASFSNAAYERLPLEDEDPNSLQMQGGSIGSPGASGVGQSQLLGGDATAPLFHGLPPNLLNSVQMPSEPFWAASTRPPF* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1154 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 287 - -
Gso17g1154 287 MobiDBLite consensus disorder prediction 47 61 - -
Gso17g1154 287 CDD DUF296 101 212 IPR005175 -
Gso17g1154 287 PIRSF ESCAROLA 14 287 IPR014476 GO:0003680
Gso17g1154 287 Gene3D - 100 235 - -
Gso17g1154 287 ProSiteProfiles PPC domain profile profile. 97 233 IPR005175 -
Gso17g1154 287 MobiDBLite consensus disorder prediction 1 92 - -
Gso17g1154 287 MobiDBLite consensus disorder prediction 26 46 - -
Gso17g1154 287 MobiDBLite consensus disorder prediction 229 248 - -
Gso17g1154 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 101 214 IPR005175 -
Gso17g1154 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 287 IPR014476 GO:0003680
Gso17g1154 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 97 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1154 Gso-Chr17 11048896 11050864 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1154 1 287 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 54.985 4.90e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1154 - - gmx:100795257 501.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g0459 5 4886403 4888349 Gso17g1154 17 11048896 11050864 GST