Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1133 ATGCTTCCCTTTTCAACTCTCTTTCAAACCCCGTTAACCACCGAGTATTGGTACAACCACCCCACAACAACACTTCTAGCGTTCTTGCTCATCTCCCTTGTTACTTGCTATGCATGGCTCAAGCCCAAGGCCCAAAGGCTTCCACCGGGCCCATCGGGCCTCCCTTTCTTCGGGAACCTCCTATCCTTGGACCCAGACCTCCACACTTACTTCGCCGTCCTGGCCCAGATCCACGGTCCAATCTTCAAGCTCCAGCTCGGGAGCAAACTCTGCATCGTGCTGACTTCGCCGCCCATGGCTCGCGCGGTGCTCAAAGAGAACGACACCGTTTTCGCAAACCGTGACGTCCCTGCCGCGGGCCGGGCCGCGAGCTACGGCGGATCCGACATAGTGTGGACCCCATACGGGCCCGAGTGGCGGATGCTGCGGAAGGTGTGCGTGGCTAAGATGCTGAGCCACGCCACGCTGGATACGGTGTACGATCTGCGCCGCGAGGAGGTGCGCAAAACGGTGTCGTATTTGCACGACCGAGTGGGGAGTGCGGTGAATATAGGGGAACAGGTTTTTCTGACGGTGATAAATGTGATAACGAACATGCTGTGGGGAGGGGTGGTGGAAGGGGCGGAGAGAGAGAGCATGGGGGCGGAGTTCAGGGAGCTTGTGGCGGAGATGACGCAGCTTTTGGGGAAGCCGAACGTGTCGGATTTTTTTCCCGGGTTGGCCCGGTTCGATTTGCAAGGTGTGGAGAAACAGATGAACGCGCTGGTGCCACGGTTCGATGGGATATTTGAACGGATGATTGGTGAAAGAAAGAAGGTGGAATTGGAAGGGGCAGAAAGGATGGACTTTCTGCAGTTTTTGTTGAAGTTGAAGGAGGAAGGCGGTGATGCCAAGACGCCACTCACCATCACCCACGTTAAGGCACTCCTTATGGACATGGTTGTCGGTGGAACTGACACATCTTCCAACACAATTGAGTTTGCAATGGCAGAAATGATGCACAATCCAGAGATAATGAAGAGAGTCCAAGAGGAGTTGGAAGTTGTAGTTGGGAAAGATAACACGGTAGAAGAGTCTCACATTCATAAGTTATCCTACTTGCAAGCTGTGATGAAAGAAACTCTAAGATTACACCCTGTGCTTCCACTTCTAGTACCTCATTGTCCTAGCGAAACCACTATTGTGGGAGGTTACACAATCCCAAAGGGGTCTCGGGTGTTTGTGAATGTGTGGGCTATTCATAGAGACCCTTCAATTTGGAAGAAATCACTCGAATTTGATCCTACAAGATTCTTAGATGCAAAATTGGATTTCAGTGGCAATGACTTCAACTATTTCCCCTTTGGATCTGGAAGAAGAATTTGTGCAGGAATAGCAATGGCTGAGAAGACGGTTTTGCATTTTCTTGCCACACTCGTACACTTATTTGATTGGACAGTACCCCAAGGAGAAAAGTTAGAGGTATCAGAGAAATTTGGAATTGTTCTCAAAAAGAAAATACCTTTGGTTGCTATCCCCACCCCACGGTTATCCAACCCAGATCTTTATCAATAG 1554 0.5051 MLPFSTLFQTPLTTEYWYNHPTTTLLAFLLISLVTCYAWLKPKAQRLPPGPSGLPFFGNLLSLDPDLHTYFAVLAQIHGPIFKLQLGSKLCIVLTSPPMARAVLKENDTVFANRDVPAAGRAASYGGSDIVWTPYGPEWRMLRKVCVAKMLSHATLDTVYDLRREEVRKTVSYLHDRVGSAVNIGEQVFLTVINVITNMLWGGVVEGAERESMGAEFRELVAEMTQLLGKPNVSDFFPGLARFDLQGVEKQMNALVPRFDGIFERMIGERKKVELEGAERMDFLQFLLKLKEEGGDAKTPLTITHVKALLMDMVVGGTDTSSNTIEFAMAEMMHNPEIMKRVQEELEVVVGKDNTVEESHIHKLSYLQAVMKETLRLHPVLPLLVPHCPSETTIVGGYTIPKGSRVFVNVWAIHRDPSIWKKSLEFDPTRFLDAKLDFSGNDFNYFPFGSGRRICAGIAMAEKTVLHFLATLVHLFDWTVPQGEKLEVSEKFGIVLKKKIPLVAIPTPRLSNPDLYQ* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1133 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
Gso17g1133 517 Pfam Cytochrome P450 48 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PRINTS P450 superfamily signature 455 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PANTHER CYTOCHROME P450, FAMILY 706, SUBFAMILY A, POLYPEPTIDE 3-RELATED 15 517 - -
Gso17g1133 517 Gene3D Cytochrome P450 37 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1133 517 PANTHER OS08G0547900 PROTEIN 15 517 - -
Gso17g1133 517 SUPERFAMILY Cytochrome P450 48 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1133 Gso-Chr17 10814578 10819006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1133 10 516 Cytochrome P450 AT4G12300 58.949 0.0 629
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1133 - - gmx:100783085 1024.23