Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso17g1132 ATGGATCTCAGCACTGTGTTGTGCTTGTTTGTTTCTTTCCTATCCATTTTTCTGTTCAAATCACTCGCCAAATCCTTCCTCTTATCTTTTAAAGGAAAACAATCACCACTTCCTCCCGGGACCATGGGCTGGCCTTACATAGGAGAAACCTTCCGAATGTATTCTCAAGACCCAACCATTTTCTTTGCCACAAAAATCAAGAGGTATGGCTCTATGTTCAAGTCACACATTTTGGGTTATCCTTGTGTGATGATTTCTGACTCGGAAGCAGCAAAGTTTATATTGAACAAAGATCAACTCTTCAAACCAACATATCCTGCTAGCAAAGAGAGGATGTTGGGGAAGCAAGCAATTTTCTTCCACCAAGGAGCATACCATGCTAACCTCAGAAGGCTTGTCCTTCGCACAGTCATGCCCGAGACCATTAAAGACCTAGTCTCTGACATTGAATCCATTGCCCAAAGTTGCCTCAAATCATGTGAAGGAAAGTTGATCACCACTTTCCTTGAAATGAAAACTTATACCTTGAATGTGGCCTTGCTTACAATTTTTGGAAGAGATGAAAATTTGTGTGGAGAGGATTTGAAGCGATGCTACTACACTATTGAGAGAGGGTACAACTCAATGCCCATAAACCTTCCAGGGACATTGTTCCACATGGCCATGAAGGCAAGGAAAGAGCTTGCACAGATCTTCACTCAAATAATCTCCACAAGGAGGAACATGAAGCAAGATCACAATGACTTGTTGGGCTTGTTCATGAGTGAAAAATCAGGACTCACTGATGAGCAAATAATAGATAACATCGTCGGTGTCATTTTTGCTGCTCGTGACACCACTGCCAGTATACTTACGTGGATTCTTAAGTACCTTGATGAAAATCCATGTGTCCTAGAAGCAGTAACGGAAGAGCAGGAGTCCATACTAAGGGCCAAGGAAGAAAGTGGAGAAAAAATGGATCTAAATTGGTCAGACACAAAAAACATGCTTATAACAACCAGGGTCATACAAGAGACTCTAAGAATAGCATCAATTTTGTCTTTTACTTTCAGAGAAGCTGTAGAGGATGTTGAATTTCAAGGGCATCTCATACCAAAAGGGTGGAAAGTATTACCGCTTTTTAGAATCATCCACCATAGTCCTGACAATTTTAAAGAGCCAGAGAAGTTTGATCCTTCAAGATTTGAGGTTGCTCCAAAACCCAATACCTTTATGCCATTTGGCGATGGGGCCCATGCATGTCCTGGCAATGAATTAGCCCAGTTGGAGATTTTGGTGCTTCTACATCATCTGACCAGAAACTACAGGTGGTCTATAATAGGTGAAAAAAATAGGATTCAATATGGCCCTTTTGCCCTTCCAGAAAATGGATTGCCCATCAAATTATATCCCAAGAAATAA 1401 0.4118 MDLSTVLCLFVSFLSIFLFKSLAKSFLLSFKGKQSPLPPGTMGWPYIGETFRMYSQDPTIFFATKIKRYGSMFKSHILGYPCVMISDSEAAKFILNKDQLFKPTYPASKERMLGKQAIFFHQGAYHANLRRLVLRTVMPETIKDLVSDIESIAQSCLKSCEGKLITTFLEMKTYTLNVALLTIFGRDENLCGEDLKRCYYTIERGYNSMPINLPGTLFHMAMKARKELAQIFTQIISTRRNMKQDHNDLLGLFMSEKSGLTDEQIIDNIVGVIFAARDTTASILTWILKYLDENPCVLEAVTEEQESILRAKEESGEKMDLNWSDTKNMLITTRVIQETLRIASILSFTFREAVEDVEFQGHLIPKGWKVLPLFRIIHHSPDNFKEPEKFDPSRFEVAPKPNTFMPFGDGAHACPGNELAQLEILVLLHHLTRNYRWSIIGEKNRIQYGPFALPENGLPIKLYPKK* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso17g1132 466 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PRINTS E-class P450 group I signature 284 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PRINTS E-class P450 group I signature 333 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PRINTS E-class P450 group I signature 373 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PANTHER CYTOCHROME P450 26 11 463 - -
Gso17g1132 466 Pfam Cytochrome P450 38 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Gso17g1132 466 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 11 463 - -
Gso17g1132 466 Gene3D Cytochrome P450 29 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PRINTS P450 superfamily signature 334 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso17g1132 466 SUPERFAMILY Cytochrome P450 35 464 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso17g1132 Gso-Chr17 10799446 10803656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso17g1132 1 443 Cytochrome P450 AT4G19230 67.865 0.0 624
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso17g1132 K09843 - gmx:100786428 906.36